C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and ubiquitin-like domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164897 TMUB1 9606 - 7:151081080-151083546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297533 TMUB1-001 151081080-151083546 protein_coding
  ENST00000392818 TMUB1-002 151081085-151083091 protein_coding
  ENST00000462940 TMUB1-003 151081086-151082908 protein_coding
  ENST00000476627 TMUB1-005 151081496-151083232 protein_coding
  ENST00000482202 TMUB1-004 151081484-151083400 protein_coding
  ENST00000488752 TMUB1-006 151081778-151083124 protein_coding
  ENST00000492838 TMUB1-007 151081834-151082981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297533ENST00000392818ENST00000462940ENST00000476627ENST00000482202ENST00000488752ENST00000492838
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297533 11.253±0.00 7.260±0.00 0.913±0.00 1.140±0.85 5.958±5.75 9.553±9.43 3.526±3.35 9.945±7.83 16.135±0.00 17.054±0.00 18.288±17.83 9.056±6.05 20.546±1.00 6.938±0.00
ENST00000392818 4.270±0.00 3.044±0.00 N/A N/A 2.812±0.00 N/A 2.966±0.00 2.542±1.34 7.002±0.00 6.218±0.00 N/A 8.658±1.74 7.005±2.94 5.413±0.00
ENST00000462940 3.729±0.00 8.047±0.00 N/A 2.952±0.00 7.357±0.00 4.633±4.38 1.863±0.00 6.146±5.18 9.943±0.00 6.358±0.00 N/A 9.828±3.43 7.670±4.15 3.744±2.36
ENST00000476627 N/A N/A N/A N/A N/A N/A N/A 1.334±0.00 N/A N/A 0.084±0.00 11.305±0.00 18.615±2.60 N/A
ENST00000482202 14.870±0.00 6.946±0.00 0.317±0.00 3.160±1.61 1.050±0.00 8.134±0.00 0.291±0.00 2.301±0.00 N/A 0.930±0.00 N/A 11.010±9.29 N/A 17.339±0.00
ENST00000488752 N/A 8.208±0.00 N/A 8.522±0.00 5.997±5.31 5.969±5.45 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492838 N/A N/A N/A N/A N/A N/A N/A N/A 0.522±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004EQ CIL_0004EQ_0001 CGP 7:151076593-151083546
CIL_0003TG CIL_0003TG_0001 CGP 7:151081080-151144436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038787 tmub1 transmembrane and ubiquitin-like domain containing 1 protein_coding Danio_rerio
ENSMUSG00000028958 Tmub1 transmembrane and ubiquitin-like domain containing 1 protein_coding Mus_musculus

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