C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and ubiquitin-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392818 TMUB1-002 ENSG00000164897 9606 - 7:151081085-151083091 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000392818
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000392818 4.270±0.00 3.044±0.00 2.812±0.00 2.966±0.00 2.542±1.34 7.002±0.00 6.218±0.00 8.658±1.74 7.005±2.94 5.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004EQ CIL_0004EQ_0001 CGP 7:151076593-151083546
CIL_0003TG CIL_0003TG_0001 CGP 7:151081080-151144436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115036 Tmub1-003 protein_coding Mus_musculus 0 1024
ENSMUST00000115033 Tmub1-002 protein_coding Mus_musculus 0 1018
ENSMUST00000030799 Tmub1-001 protein_coding Mus_musculus 0 1018
ENSMUST00000127194 Tmub1-005 protein_coding Mus_musculus 0 649

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