C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and ubiquitin-like domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028958 Tmub1 10090 - 5:24445458-24447854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030799 Tmub1-001 24445458-24447854 protein_coding
  ENSMUST00000115033 Tmub1-002 24445466-24447625 protein_coding
  ENSMUST00000115036 Tmub1-003 24445466-24447317 protein_coding
  ENSMUST00000123167 Tmub1-004 24446553-24447791 protein_coding
  ENSMUST00000127194 Tmub1-005 24446049-24447587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030799ENSMUST00000115033ENSMUST00000115036ENSMUST00000123167ENSMUST00000127194
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030799 9.439±2.66 24.170±2.46 10.931±0.98 18.710±0.85 18.616±7.87 45.508±4.95 8.631±1.56 19.122±2.20 6.906±3.13 16.202±1.88 9.388±1.46 18.819±5.90 7.713±6.16 2.464±0.50
ENSMUST00000115033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 0.927±0.24
ENSMUST00000115036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.050±0.00 2.925±1.08 0.513±0.01
ENSMUST00000123167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.464±0.00 4.685±0.00 2.115±0.00 N/A
ENSMUST00000127194 N/A N/A N/A N/A 0.886±0.00 N/A N/A N/A N/A N/A N/A 1.145±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_0004EQ CIL_0004EQ_0002 CGP 5:24438440-24447854
CIL_0003TG CIL_0003TG_0002 CGP 5:24445458-24502047

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038787 tmub1 transmembrane and ubiquitin-like domain containing 1 protein_coding Danio_rerio
ENSG00000164897 TMUB1 transmembrane and ubiquitin-like domain containing 1 protein_coding Homo_sapiens

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