C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 183
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165188 RNF183 9606 - 9:113297093-113303376 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297894 RNF183-001 113297454-113303271 protein_coding
  ENST00000416588 RNF183-004 113297443-113298865 protein_coding
  ENST00000441031 RNF183-002 113297093-113299196 protein_coding
  ENST00000443976 RNF183-003 113302101-113303376 processed_transcript
  ENST00000478493 RNF183-007 113299647-113303115 processed_transcript
  ENST00000478815 RNF183-005 113297454-113299765 protein_coding
  ENST00000489339 RNF183-006 113299648-113303274 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000297894ENST00000416588ENST00000441031ENST00000443976ENST00000478493ENST00000478815ENST00000489339
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000297894 N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.01 N/A N/A
ENST00000416588 N/A N/A N/A N/A 0.052±0.00 0.065±0.00 N/A N/A N/A N/A N/A
ENST00000441031 0.014±0.00 N/A 0.161±0.00 0.152±0.08 N/A N/A 1.526±0.00 0.138±0.00 0.462±0.41 N/A 1.023±0.00
ENST00000443976 N/A 0.376±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478493 N/A N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A
ENST00000478815 N/A N/A N/A 0.057±0.01 N/A 0.035±0.00 N/A N/A 0.042±0.01 N/A N/A
ENST00000489339 N/A N/A N/A N/A N/A N/A N/A N/A 0.256±0.00 0.050±0.00 0.732±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CQ CIL_0004CQ_0001 CGP 9:113275343-113303376
CIL_0004CS CIL_0004CS_0001 CGP 9:113297093-113340298

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000063851 Rnf183 ring finger protein 183 protein_coding Mus_musculus

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