C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 183
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416588 RNF183-004 ENSG00000165188 9606 - 9:113297443-113298865 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartENST00000416588
Transcript ID Colon Heart
ENST00000416588 0.052±0.00 0.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CQ CIL_0004CQ_0001 CGP 9:113275343-113303376
CIL_0004CS CIL_0004CS_0001 CGP 9:113297093-113340298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107454 Rnf183-002 protein_coding Mus_musculus 0 614
ENSMUST00000107455 Rnf183-001 protein_coding Mus_musculus 0 614
ENSMUST00000079420 Rnf183-201 protein_coding Mus_musculus 0 604

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