C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: highly divergent homeobox
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165259 HDX 9606 - X:84317874-84502479 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297977 HDX-003 84317874-84502453 protein_coding
  ENST00000373177 HDX-002 84321197-84502391 protein_coding
  ENST00000449553 HDX-005 84468928-84502479 protein_coding
  ENST00000465509 HDX-006 84500025-84502453 processed_transcript
  ENST00000472135 HDX-004 84439973-84469576 retained_intron
  ENST00000506585 HDX-001 84317878-84502453 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297977ENST00000373177ENST00000449553ENST00000472135ENST00000506585
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297977 0.216±0.00 N/A 0.065±0.00 0.426±0.14 0.158±0.00 0.113±0.07 0.073±0.01 0.248±0.00 0.473±0.00 0.155±0.00 N/A 0.241±0.15 0.018±0.00 0.156±0.00
ENST00000373177 N/A 0.119±0.00 0.389±0.00 0.362±0.24 0.201±0.00 0.269±0.08 0.157±0.00 0.317±0.00 0.324±0.00 0.461±0.00 0.059±0.03 0.160±0.09 0.076±0.03 0.564±0.26
ENST00000449553 N/A N/A N/A N/A N/A 0.845±0.00 0.634±0.00 N/A 0.684±0.43 1.520±0.00 0.146±0.00 N/A N/A N/A
ENST00000472135 N/A N/A N/A N/A 0.832±0.00 0.215±0.00 N/A 0.350±0.00 0.278±0.24 0.390±0.00 N/A 0.106±0.07 N/A N/A
ENST00000506585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.047±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KW CIL_0003KW_0001 CGP X:84058346-84502479

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079382 HDX highly divergent homeobox protein_coding Danio_rerio
ENSMUSG00000034551 Hdx highly divergent homeobox protein_coding Mus_musculus

Loading