C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: highly divergent homeobox
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034551 Hdx 10090 - X:111569931-111697079 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038472 Hdx-002 111569933-111697079 protein_coding
  ENSMUST00000113422 Hdx-001 111569931-111697079 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038472ENSMUST00000113422
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038472 0.050±0.02 N/A 0.036±0.01 0.246±0.17 0.039±0.00 0.012±0.00 0.011±0.01 0.014±0.00 0.018±0.01 0.073±0.01 0.018±0.01 0.137±0.06 0.044±0.02 N/A
ENSMUST00000113422 N/A 0.053±0.00 N/A 0.216±0.11 N/A N/A N/A N/A 0.007±0.01 0.129±0.01 N/A 0.090±0.03 0.070±0.02 0.029±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KW CIL_0003KW_0002 CGP X:111388192-111697079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079382 HDX highly divergent homeobox protein_coding Danio_rerio
ENSG00000165259 HDX highly divergent homeobox protein_coding Homo_sapiens

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