C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000072133-ENSG00000165259 CGP 9606 X:84058346-84502479
GeneTranscriptPositionBiotype
ENSG00000072133 (RPS6KA6)
ribosomal protein S6 kinase, 90kDa, polypeptide 6 		ENST00000262752 (RPS6KA6-001) 84063976-84187907 protein_coding
ENST00000460730 (RPS6KA6-002) 84156075-84187898 processed_transcript
ENST00000495332 (RPS6KA6-003) 84096194-84106461 processed_transcript
ENST00000543399 (RPS6KA6-201) 84064248-84187925 protein_coding
ENST00000620340 (RPS6KA6-202) 84058346-84186141 protein_coding
ENSG00000165259 (HDX)
highly divergent homeobox 		ENST00000297977 (HDX-003) 84317874-84502453 protein_coding
ENST00000373177 (HDX-002) 84321197-84502391 protein_coding
ENST00000449553 (HDX-005) 84468928-84502479 protein_coding
ENST00000465509 (HDX-006) 84500025-84502453 processed_transcript
ENST00000472135 (HDX-004) 84439973-84469576 retained_intron
ENST00000506585 (HDX-001) 84317878-84502453 protein_coding
CIL_0003KW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025665-ENSMUSG00000034551 CGP 10090 X:111388192-111697079
GeneTranscriptPositionBiotype
ENSMUSG00000025665 (Rps6ka6)
ribosomal protein S6 kinase polypeptide 6 		ENSMUST00000065976 (Rps6ka6-002) 111388192-111463043 protein_coding
ENSMUST00000082034 (Rps6ka6-201) 111388193-111486782 protein_coding
ENSMUST00000096348 (Rps6ka6-001) 111388192-111463195 protein_coding
ENSMUST00000113428 (Rps6ka6-011) 111388193-111463195 protein_coding
ENSMUST00000123102 (Rps6ka6-009) 111439180-111462639 nonsense_mediated_decay
ENSMUST00000123213 (Rps6ka6-004) 111434359-111463455 protein_coding
ENSMUST00000123951 (Rps6ka6-008) 111446238-111537959 protein_coding
ENSMUST00000128819 (Rps6ka6-005) 111435265-111531176 protein_coding
ENSMUST00000132319 (Rps6ka6-007) 111439257-111537947 protein_coding
ENSMUST00000137712 (Rps6ka6-003) 111389780-111463105 protein_coding
ENSMUST00000138645 (Rps6ka6-010) 111434327-111486761 protein_coding
ENSMUST00000156639 (Rps6ka6-006) 111450331-111536342 protein_coding
ENSMUSG00000034551 (Hdx)
highly divergent homeobox 		ENSMUST00000038472 (Hdx-002) 111569933-111697079 protein_coding
ENSMUST00000113422 (Hdx-001) 111569931-111697079 protein_coding
ENSMUSG00000083898 (Gm7340)
predicted gene 7340 		ENSMUST00000119729 (Gm7340-001) 111571699-111574450 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KW_0001ENSG00000072133ENST00000262752ENST00000460730ENST00000495332ENST00000543399ENST00000620340ENSG00000165259ENST00000297977ENST00000373177ENST00000449553ENST00000465509ENST00000472135ENST00000506585CIL_0003KW_0002ENSMUSG00000025665ENSMUST00000065976ENSMUST00000082034ENSMUST00000096348ENSMUST00000113428ENSMUST00000123102ENSMUST00000123213ENSMUST00000123951ENSMUST00000128819ENSMUST00000132319ENSMUST00000137712ENSMUST00000138645ENSMUST00000156639ENSMUSG00000034551ENSMUST00000038472ENSMUST00000113422ENSMUSG00000083898ENSMUST00000119729
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KW_0001ENSG00000072133ENST00000262752ENST00000495332ENST00000620340ENSG00000165259ENST00000297977ENST00000373177ENST00000449553ENST00000472135ENST00000506585CIL_0003KW_0002ENSMUSG00000025665ENSMUST00000065976ENSMUST00000082034ENSMUST00000096348ENSMUST00000113428ENSMUST00000123213ENSMUST00000123951ENSMUST00000128819ENSMUST00000132319ENSMUST00000137712ENSMUST00000156639ENSMUSG00000034551ENSMUST00000038472ENSMUST00000113422ENSMUSG00000083898ENSMUST00000119729
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072133 ENST00000262752 N/A N/A 0.469±0.00 0.873±0.00 0.483±0.00 N/A 0.103±0.00 N/A 0.057±0.00 0.185±0.00 N/A 0.375±0.00 0.075±0.00 0.363±0.00
ENST00000460730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495332 N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.326±0.00 0.202±0.00 1.721±0.00
ENST00000543399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620340 0.145±0.00 0.220±0.00 N/A N/A 0.039±0.00 0.624±0.00 0.045±0.03 1.207±1.14 0.094±0.00 N/A N/A 0.199±0.25 0.029±0.00 0.371±0.00
ENSG00000165259 ENST00000297977 0.216±0.00 N/A 0.065±0.00 0.426±0.14 0.158±0.00 0.113±0.07 0.073±0.01 0.248±0.00 0.473±0.00 0.155±0.00 N/A 0.241±0.15 0.018±0.00 0.156±0.00
ENST00000373177 N/A 0.119±0.00 0.389±0.00 0.362±0.24 0.201±0.00 0.269±0.08 0.157±0.00 0.317±0.00 0.324±0.00 0.461±0.00 0.059±0.03 0.160±0.09 0.076±0.03 0.564±0.26
ENST00000449553 N/A N/A N/A N/A N/A 0.845±0.00 0.634±0.00 N/A 0.684±0.43 1.520±0.00 0.146±0.00 N/A N/A N/A
ENST00000465509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472135 N/A N/A N/A N/A 0.832±0.00 0.215±0.00 N/A 0.350±0.00 0.278±0.24 0.390±0.00 N/A 0.106±0.07 N/A N/A
ENST00000506585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.047±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025665 ENSMUST00000065976 N/A N/A N/A 0.576±0.00 0.223±0.00 N/A N/A N/A N/A N/A 0.032±0.02 0.544±0.00 6.096±0.74 N/A
ENSMUST00000082034 N/A N/A N/A N/A N/A 0.100±0.04 N/A 0.313±0.09 0.942±0.00 N/A 0.006±0.00 0.256±0.05 12.140±2.18 N/A
ENSMUST00000096348 0.353±0.00 0.023±0.00 0.054±0.00 3.205±1.46 0.031±0.01 N/A N/A N/A 0.591±0.64 0.312±0.09 0.014±0.01 N/A N/A 0.443±0.16
ENSMUST00000113428 N/A 0.041±0.01 0.092±0.00 1.199±0.00 0.068±0.04 N/A 0.043±0.03 N/A 0.261±0.37 0.137±0.03 0.035±0.01 0.357±0.25 9.413±3.50 0.805±0.17
ENSMUST00000123102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123213 N/A 0.063±0.00 N/A N/A N/A N/A 0.101±0.00 N/A N/A 0.118±0.03 N/A 0.193±0.04 N/A N/A
ENSMUST00000123951 N/A N/A N/A N/A 0.292±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A N/A 4.702±0.00
ENSMUST00000132319 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A 0.119±0.00 N/A 0.176±0.00 N/A N/A
ENSMUST00000137712 N/A N/A N/A 0.491±0.00 0.073±0.03 0.299±0.20 0.035±0.02 N/A 0.028±0.00 0.167±0.00 0.030±0.00 0.315±0.19 8.441±2.62 1.826±0.28
ENSMUST00000138645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156639 N/A 0.149±0.10 N/A N/A N/A 0.175±0.03 0.153±0.00 N/A N/A N/A N/A 0.185±0.08 N/A N/A
ENSMUSG00000034551 ENSMUST00000038472 0.050±0.02 N/A 0.036±0.01 0.246±0.17 0.039±0.00 0.012±0.00 0.011±0.01 0.014±0.00 0.018±0.01 0.073±0.01 0.018±0.01 0.137±0.06 0.044±0.02 N/A
ENSMUST00000113422 N/A 0.053±0.00 N/A 0.216±0.11 N/A N/A N/A N/A 0.007±0.01 0.129±0.01 N/A 0.090±0.03 0.070±0.02 0.029±0.01
ENSMUSG00000083898 ENSMUST00000119729 0.592±0.36 1.704±0.41 N/A 1.682±1.23 0.481±0.17 0.158±0.11 0.171±0.04 0.195±0.07 0.086±0.05 1.256±0.08 0.032±0.01 2.681±1.17 0.155±0.09 0.053±0.02

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