C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired-like homeobox 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165462 PHOX2A 9606 - 11:72239077-72245664 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298231 PHOX2A-001 72239077-72244176 protein_coding
  ENST00000544057 PHOX2A-003 72239867-72245664 processed_transcript
  ENST00000546310 PHOX2A-002 72239077-72241192 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0001 VISTA 11:72069476-72670457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003357 NAS noradrenergic neuron differentiation
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0021523 IEA somatic motor neuron differentiation
GO:0021623 IEA oculomotor nerve formation
GO:0021642 IEA trochlear nerve formation
GO:0021703 IEA locus ceruleus development
GO:0030901 IEA midbrain development
GO:0043576 IEA regulation of respiratory gaseous exchange
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048485 IEA sympathetic nervous system development
GO:0048486 IEA parasympathetic nervous system development
GO:0071542 IC dopaminergic neuron differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007406 phox2a paired-like homeobox 2a protein_coding Danio_rerio
ENSMUSG00000007946 Phox2a paired-like homeobox 2a protein_coding Mus_musculus

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