C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired-like homeobox 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007946 Phox2a 10090 + 7:101818313-101822726 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000008090 Phox2a-001 101818313-101822726 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000008090
Transcript ID Adrenal
ENSMUST00000008090 13.204±3.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0002 VISTA 7:101413526-102014552
CIL_000300 CIL_000300_0002 CGP 7:101818313-101838076

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003357 IMP noradrenergic neuron differentiation
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0021523 IMP somatic motor neuron differentiation
GO:0021623 IMP oculomotor nerve formation
GO:0021642 IMP trochlear nerve formation
GO:0021703 IMP locus ceruleus development
GO:0030901 IMP midbrain development
GO:0043576 IMP regulation of respiratory gaseous exchange
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048485 IMP sympathetic nervous system development
GO:0048486 IMP parasympathetic nervous system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007406 phox2a paired-like homeobox 2a protein_coding Danio_rerio
ENSG00000165462 PHOX2A paired-like homeobox 2a protein_coding Homo_sapiens

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