C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165533 TTC8 9606 + 14:88824153-88881078 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338104 TTC8-005 88824656-88877988 protein_coding
  ENST00000345383 TTC8-201 88824153-88877995 protein_coding
  ENST00000346301 TTC8-006 88824656-88877988 protein_coding
  ENST00000354441 TTC8-007 88824660-88877951 protein_coding
  ENST00000358622 TTC8-202 88824153-88877995 protein_coding
  ENST00000380656 TTC8-008 88824662-88877987 protein_coding
  ENST00000536576 TTC8-203 88824153-88877995 protein_coding
  ENST00000553718 TTC8-011 88824594-88834006 nonsense_mediated_decay
  ENST00000554686 TTC8-010 88824739-88877956 protein_coding
  ENST00000555057 TTC8-009 88824672-88877971 nonsense_mediated_decay
  ENST00000556077 TTC8-003 88824153-88853046 nonsense_mediated_decay
  ENST00000556133 TTC8-014 88840839-88857265 retained_intron
  ENST00000556567 TTC8-004 88824651-88853034 retained_intron
  ENST00000556651 TTC8-012 88824685-88852997 protein_coding
  ENST00000557580 TTC8-013 88841485-88875107 protein_coding
  ENST00000614125 TTC8-204 88824153-88877995 protein_coding
  ENST00000622513 TTC8-001 88824624-88881078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338104ENST00000346301ENST00000354441ENST00000380656ENST00000536576ENST00000554686ENST00000555057ENST00000556077ENST00000556567ENST00000556651ENST00000557580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338104 N/A N/A N/A N/A N/A N/A N/A N/A 1.186±0.00 N/A N/A N/A N/A N/A
ENST00000346301 1.930±0.00 2.464±0.00 N/A 2.813±0.23 3.573±0.00 1.597±0.00 0.430±0.19 2.518±1.66 2.029±1.01 0.940±0.00 N/A 5.016±3.67 1.801±0.13 4.052±1.06
ENST00000354441 N/A N/A N/A 1.826±0.00 N/A 1.042±0.00 N/A 2.191±0.00 N/A 0.724±0.07 0.164±0.00 5.877±0.00 N/A 3.752±0.00
ENST00000380656 N/A N/A N/A 1.246±0.00 0.619±0.00 0.667±0.00 0.608±0.00 0.577±0.00 N/A N/A N/A 6.897±0.86 0.564±0.05 2.395±0.00
ENST00000536576 N/A 0.943±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554686 N/A N/A 0.799±0.00 N/A N/A 0.730±0.12 0.782±0.00 0.564±0.00 N/A 0.426±0.00 N/A 0.974±0.00 0.938±0.00 2.642±0.00
ENST00000555057 N/A N/A N/A N/A N/A 0.583±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.328±0.00 N/A N/A N/A
ENST00000556567 N/A N/A 1.585±0.00 N/A 1.740±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556651 N/A N/A N/A N/A 2.072±0.00 N/A 1.119±0.00 N/A 4.578±0.00 3.950±0.00 N/A N/A N/A N/A
ENST00000557580 N/A 2.691±0.00 N/A 3.952±0.00 2.130±0.00 N/A 0.853±0.00 1.321±0.00 N/A 1.671±0.00 0.060±0.00 3.495±0.44 2.011±0.00 10.636±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KH CIL_0004KH_0001 CGP 14:88612431-88881078
CIL_0004KI CIL_0004KI_0001 CGP 14:88824153-89619149

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001103 IPI RNA polymerase II repressing transcription factor binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0005886 IEA plasma membrane
GO:0005929 IDA cilium
GO:0007411 IEA axon guidance
GO:0007608 IEA sensory perception of smell
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0021772 IEA olfactory bulb development
GO:0032391 IEA photoreceptor connecting cilium
GO:0032880 IEA regulation of protein localization
GO:0034464 IDA BBSome
GO:0035058 IEA nonmotile primary cilium assembly
GO:0035264 IEA multicellular organism growth
GO:0036064 IDA ciliary basal body
GO:0042384 TAS cilium assembly
GO:0045444 IEA fat cell differentiation
GO:0048560 IMP establishment of anatomical structure orientation
GO:0050893 TAS sensory processing
GO:0060219 IEA camera-type eye photoreceptor cell differentiation
GO:0061326 IEA renal tubule development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044689 ttc8 tetratricopeptide repeat domain 8 protein_coding Danio_rerio
ENSMUSG00000021013 Ttc8 tetratricopeptide repeat domain 8 protein_coding Mus_musculus

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