C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380656 TTC8-008 ENSG00000165533 9606 + 14:88824662-88877987 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyOvaryPlacentaTestisENST00000380656
Transcript ID Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000380656 1.246±0.00 0.619±0.00 0.667±0.00 0.608±0.00 0.577±0.00 6.897±0.86 0.564±0.05 2.395±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KH CIL_0004KH_0001 CGP 14:88612431-88881078
CIL_0004KI CIL_0004KI_0001 CGP 14:88824153-89619149

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001103 IPI RNA polymerase II repressing transcription factor binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0005886 IEA plasma membrane
GO:0005929 IDA cilium
GO:0015031 IEA protein transport
GO:0034464 IDA BBSome
GO:0035058 IEA nonmotile primary cilium assembly
GO:0036064 IDA ciliary basal body
GO:0042384 TAS cilium assembly
GO:0048560 IMP establishment of anatomical structure orientation
GO:0050893 TAS sensory processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079146 Ttc8-002 protein_coding Mus_musculus 0 1884
ENSMUST00000085109 Ttc8-001 protein_coding Mus_musculus 0 1685
ENSMUST00000132878 Ttc8-003 protein_coding Mus_musculus 0 824
ENSMUST00000124514 Ttc8-005 processed_transcript Mus_musculus 0 778
ENSMUST00000168255 Ttc8-006 processed_transcript Mus_musculus 0 715
ENSMUST00000139298 Ttc8-004 processed_transcript Mus_musculus 0 556

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