C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165629 ATP5C1 9606 + 10:7788129-7807815 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335698 ATP5C1-002 7788177-7807815 protein_coding
  ENST00000356708 ATP5C1-001 7788129-7807815 protein_coding
  ENST00000460362 ATP5C1-007 7788175-7796895 processed_transcript
  ENST00000460820 ATP5C1-008 7788184-7800052 processed_transcript
  ENST00000462760 ATP5C1-003 7788159-7796588 processed_transcript
  ENST00000465936 ATP5C1-005 7788179-7807793 processed_transcript
  ENST00000472202 ATP5C1-004 7788210-7799550 retained_intron
  ENST00000473809 ATP5C1-009 7800052-7807801 processed_transcript
  ENST00000480528 ATP5C1-010 7802243-7807801 processed_transcript
  ENST00000493053 ATP5C1-006 7788147-7807801 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335698ENST00000356708ENST00000460820ENST00000472202ENST00000480528ENST00000493053
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335698 22.887±0.00 19.602±0.00 N/A 15.337±8.82 20.395±15.86 29.253±12.90 137.747±92.95 N/A 10.301±0.00 15.207±5.77 57.012±9.24 25.315±13.33 27.059±8.59 33.019±0.00
ENST00000356708 6.162±0.00 N/A 6.735±0.00 22.240±0.54 4.428±0.00 14.712±0.00 N/A 43.562±16.04 20.735±15.69 6.135±0.00 N/A 28.857±12.12 68.189±16.65 N/A
ENST00000460820 N/A N/A 13.725±0.00 15.295±0.00 18.105±0.00 18.165±0.00 30.629±0.00 8.175±0.00 10.008±0.00 N/A N/A 77.350±63.66 103.391±0.00 31.063±0.00
ENST00000472202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.042±0.00
ENST00000480528 N/A 24.852±0.00 N/A N/A N/A N/A N/A N/A 20.654±0.00 N/A N/A 34.403±0.00 N/A N/A
ENST00000493053 9.927±0.00 28.520±0.00 N/A 29.437±0.00 24.168±0.00 20.487±0.00 N/A 91.938±0.00 24.907±0.00 18.584±0.00 N/A 22.810±0.00 N/A 16.755±9.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000275 NAS mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
GO:0005739 ISS mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005753 IDA mitochondrial proton-transporting ATP synthase complex
GO:0005759 TAS mitochondrial matrix
GO:0006119 NAS oxidative phosphorylation
GO:0006200 IDA ATP catabolic process
GO:0006754 NAS ATP biosynthetic process
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0016020 IDA membrane
GO:0016887 IDA ATPase activity
GO:0022857 IC transmembrane transporter activity
GO:0022904 TAS respiratory electron transport chain
GO:0042776 IC mitochondrial ATP synthesis coupled proton transport
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045261 IEA proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045514 atp5c1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein_coding Danio_rerio
ENSMUSG00000025781 Atp5c1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein_coding Mus_musculus

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