C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025781 Atp5c1 10090 - 2:10056016-10080510 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026887 Atp5c1-002 10056016-10080427 protein_coding
  ENSMUST00000114896 Atp5c1-003 10056030-10080444 protein_coding
  ENSMUST00000114897 Atp5c1-001 10056030-10080510 protein_coding
  ENSMUST00000130067 Atp5c1-006 10064159-10080055 protein_coding
  ENSMUST00000139810 Atp5c1-004 10063481-10080176 protein_coding
  ENSMUST00000145530 Atp5c1-005 10063286-10080322 protein_coding
  ENSMUST00000153554 Atp5c1-007 10063337-10079859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026887ENSMUST00000114897ENSMUST00000139810
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026887 108.063±6.02 103.266±17.83 66.973±4.48 41.798±0.00 290.645±121.68 178.185±14.61 742.361±140.46 239.767±43.02 121.904±33.71 83.783±7.29 483.881±16.85 136.443±64.71 30.802±9.63 35.916±12.60
ENSMUST00000114897 144.710±39.51 75.117±12.95 87.484±8.96 99.381±47.69 75.028±19.74 62.543±9.73 N/A 259.438±57.90 144.224±52.43 33.356±1.61 N/A 136.745±76.74 134.107±72.94 48.304±19.20
ENSMUST00000139810 N/A N/A N/A 270.698±0.00 N/A N/A N/A N/A N/A N/A N/A 371.152±0.00 308.628±145.40 145.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WL CIL_0000WL_0002 CGP 2:9914552-10080510
CIL_0000PV CIL_0000PV_0002 CGP 2:10056016-10092806

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0006200 IEA ATP catabolic process
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0044822 IEA poly(A) RNA binding
GO:0045261 IEA proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045514 atp5c1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein_coding Danio_rerio
ENSG00000165629 ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein_coding Homo_sapiens

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