C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356708 ATP5C1-001 ENSG00000165629 9606 + 10:7788129-7807815 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENST00000356708
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000356708 6.162±0.00 6.735±0.00 22.240±0.54 4.428±0.00 14.712±0.00 43.562±16.04 20.735±15.69 6.135±0.00 28.857±12.12 68.189±16.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000275 NAS mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
GO:0005739 ISS mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005753 IDA mitochondrial proton-transporting ATP synthase complex
GO:0005759 TAS mitochondrial matrix
GO:0006119 NAS oxidative phosphorylation
GO:0006200 IDA ATP catabolic process
GO:0006754 NAS ATP biosynthetic process
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0016020 IDA membrane
GO:0016887 IDA ATPase activity
GO:0022857 IC transmembrane transporter activity
GO:0022904 TAS respiratory electron transport chain
GO:0042776 IC mitochondrial ATP synthesis coupled proton transport
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045261 IEA proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114897 Atp5c1-001 protein_coding Mus_musculus 0 1164
ENSMUST00000114896 Atp5c1-003 protein_coding Mus_musculus 0 1103
ENSMUST00000026887 Atp5c1-002 protein_coding Mus_musculus 0 1031
ENSMUST00000145530 Atp5c1-005 protein_coding Mus_musculus 0 645
ENSMUST00000153554 Atp5c1-007 protein_coding Mus_musculus 0 593
ENSMUST00000139810 Atp5c1-004 protein_coding Mus_musculus 0 531
ENSMUST00000121271 Gm13263-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000130067 Atp5c1-006 protein_coding Mus_musculus 0 333

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