C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis and oogenesis specific basic helix-loop-helix 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165643 SOHLH1 9606 - 9:135693407-135699528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298466 SOHLH1-001 135693407-135699528 protein_coding
  ENST00000425225 SOHLH1-201 135693411-135699528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastOvaryTestisENST00000298466ENST00000425225
Transcript ID Adipose Brain Breast Ovary Testis
ENST00000298466 N/A 0.537±0.00 N/A 0.138±0.00 N/A
ENST00000425225 0.043±0.00 2.354±0.75 0.053±0.00 N/A 17.659±3.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EX CIL_0001EX_0001 CGP 9:135663322-135699528
CIL_0001EW CIL_0001EW_0001 CGP 9:135693407-135793150

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 IEA ovarian follicle development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007283 IEA spermatogenesis
GO:0010468 IEA regulation of gene expression
GO:0030154 IEA cell differentiation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0048477 IEA oogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000059625 Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein_coding Mus_musculus

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