C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis and oogenesis specific basic helix-loop-helix 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059625 Sohlh1 10090 - 2:25842995-25847248 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076989 Sohlh1-001 25842995-25847248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyOvaryPlacentaTestisENSMUST00000076989
Transcript ID Adipose Bladder Brain Kidney Ovary Placenta Testis
ENSMUST00000076989 0.024±0.00 0.010±0.00 0.041±0.00 0.036±0.01 1.856±0.96 0.061±0.02 1.375±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EX CIL_0001EX_0002 CGP 2:25823153-25847248
CIL_0001EW CIL_0001EW_0002 CGP 2:25842995-25918273

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0010468 IMP regulation of gene expression
GO:0030154 IMP cell differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0048477 IMP oogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165643 SOHLH1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein_coding Homo_sapiens

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