C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001EW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165643-ENSG00000107147 CGP 9606 9:135693407-135793150
GeneTranscriptPositionBiotype
ENSG00000107147 (KCNT1)
potassium channel, subfamily T, member 1 		ENST00000263604 (KCNT1-201) 135736633-135793146 protein_coding
ENST00000371757 (KCNT1-002) 135702192-135793103 protein_coding
ENST00000460750 (KCNT1-003) 135702213-135793103 nonsense_mediated_decay
ENST00000473941 (KCNT1-010) 135714458-135759839 protein_coding
ENST00000475008 (KCNT1-008) 135788989-135793146 retained_intron
ENST00000486577 (KCNT1-007) 135714554-135792161 protein_coding
ENST00000487664 (KCNT1-001) 135702185-135793150 protein_coding
ENST00000488444 (KCNT1-005) 135736625-135792164 protein_coding
ENST00000490355 (KCNT1-006) 135736633-135792164 protein_coding
ENST00000490363 (KCNT1-009) 135753751-135786399 retained_intron
ENST00000491806 (KCNT1-004) 135736519-135792164 protein_coding
ENSG00000165643 (SOHLH1)
spermatogenesis and oogenesis specific basic helix-loop-helix 1 		ENST00000298466 (SOHLH1-001) 135693407-135699528 protein_coding
ENST00000425225 (SOHLH1-201) 135693411-135699528 protein_coding
CIL_0001EW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059625-ENSMUSG00000058740 CGP 10090 2:25842995-25918273
GeneTranscriptPositionBiotype
ENSMUSG00000058740 (Kcnt1)
potassium channel, subfamily T, member 1 		ENSMUST00000037580 (Kcnt1-001) 25877873-25918273 protein_coding
ENSMUST00000114170 (Kcnt1-002) 25877857-25895175 protein_coding
ENSMUST00000114172 (Kcnt1-003) 25877881-25918273 protein_coding
ENSMUST00000114176 (Kcnt1-004) 25877875-25918273 protein_coding
ENSMUST00000128502 (Kcnt1-009) 25900277-25903395 processed_transcript
ENSMUST00000131529 (Kcnt1-008) 25890647-25894460 processed_transcript
ENSMUST00000138568 (Kcnt1-005) 25894343-25916590 processed_transcript
ENSMUST00000145544 (Kcnt1-006) 25908063-25916923 processed_transcript
ENSMUST00000150788 (Kcnt1-007) 25863795-25888942 processed_transcript
ENSMUST00000153001 (Kcnt1-010) 25903502-25909905 processed_transcript
ENSMUST00000171268 (Kcnt1-201) 25863854-25916117 protein_coding
ENSMUSG00000059625 (Sohlh1)
spermatogenesis and oogenesis specific basic helix-loop-helix 1 		ENSMUST00000076989 (Sohlh1-001) 25842995-25847248 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EW_0001ENSG00000107147ENST00000263604ENST00000371757ENST00000460750ENST00000473941ENST00000475008ENST00000486577ENST00000487664ENST00000488444ENST00000490355ENST00000490363ENST00000491806ENSG00000165643ENST00000298466ENST00000425225CIL_0001EW_0002ENSMUSG00000058740ENSMUST00000037580ENSMUST00000114170ENSMUST00000114172ENSMUST00000114176ENSMUST00000128502ENSMUST00000131529ENSMUST00000138568ENSMUST00000145544ENSMUST00000150788ENSMUST00000153001ENSMUST00000171268ENSMUSG00000059625ENSMUST00000076989
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EW_0001ENSG00000107147ENST00000263604ENST00000371757ENST00000460750ENST00000475008ENST00000487664ENST00000490355ENST00000490363ENST00000491806ENSG00000165643ENST00000298466ENST00000425225CIL_0001EW_0002ENSMUSG00000058740ENSMUST00000037580ENSMUST00000114170ENSMUST00000114172ENSMUST00000114176ENSMUST00000128502ENSMUST00000131529ENSMUST00000138568ENSMUST00000145544ENSMUST00000150788ENSMUST00000153001ENSMUST00000171268ENSMUSG00000059625ENSMUST00000076989
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107147 ENST00000263604 N/A N/A N/A 1.181±0.58 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371757 N/A N/A N/A N/A 0.254±0.00 0.010±0.00 0.133±0.00 N/A N/A N/A 1.129±0.03 0.619±0.40 0.193±0.06 0.173±0.02
ENST00000460750 N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A 0.223±0.00
ENST00000473941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475008 N/A N/A N/A 0.590±0.00 0.050±0.00 0.012±0.00 N/A 0.008±0.00 N/A N/A 0.581±0.00 0.163±0.08 N/A 0.103±0.03
ENST00000486577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487664 N/A N/A N/A 3.813±0.00 N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A 0.116±0.00 N/A
ENST00000488444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490355 N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000490363 0.058±0.00 0.117±0.00 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.823±0.00 1.141±0.00 0.060±0.00 N/A
ENST00000491806 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.00
ENSG00000165643 ENST00000298466 N/A N/A N/A 0.537±0.00 N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A
ENST00000425225 0.043±0.00 N/A N/A 2.354±0.75 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 17.659±3.81
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000058740 ENSMUST00000037580 N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A 0.002±0.00 0.006±0.00 N/A N/A N/A N/A
ENSMUST00000114170 N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A
ENSMUST00000114172 N/A N/A 0.205±0.00 N/A 0.006±0.00 0.054±0.00 N/A N/A 0.004±0.00 0.007±0.00 N/A N/A 0.054±0.00 N/A
ENSMUST00000114176 N/A 0.878±0.14 0.687±0.11 2.551±0.08 0.022±0.02 0.097±0.04 0.064±0.00 3.423±1.47 0.008±0.00 0.016±0.01 0.025±0.00 2.047±0.70 0.002±0.00 0.317±0.00
ENSMUST00000128502 N/A N/A N/A N/A 0.176±0.00 N/A N/A N/A 0.083±0.00 0.099±0.00 0.176±0.00 N/A N/A 0.809±0.00
ENSMUST00000131529 N/A N/A N/A N/A 0.121±0.01 N/A 0.226±0.00 N/A N/A 0.063±0.00 N/A N/A 0.062±0.04 N/A
ENSMUST00000138568 N/A 0.500±0.05 N/A 2.417±0.08 N/A 0.123±0.00 N/A N/A 0.010±0.00 N/A 0.042±0.01 N/A 0.036±0.00 0.437±0.00
ENSMUST00000145544 N/A N/A N/A 7.747±6.30 0.016±0.00 0.181±0.07 N/A N/A 0.035±0.01 N/A 0.049±0.02 N/A 0.080±0.10 0.099±0.00
ENSMUST00000150788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.792±0.00 N/A N/A
ENSMUST00000153001 N/A N/A N/A N/A 0.071±0.00 0.379±0.00 N/A N/A 0.075±0.02 0.061±0.02 0.045±0.01 N/A 0.258±0.20 N/A
ENSMUST00000171268 N/A 2.034±1.17 N/A 5.104±2.15 0.064±0.02 0.297±0.13 N/A 2.032±0.00 0.020±0.00 0.026±0.02 0.058±0.01 5.030±1.31 N/A 0.593±0.08
ENSMUSG00000059625 ENSMUST00000076989 0.024±0.00 N/A 0.010±0.00 0.041±0.00 N/A N/A N/A 0.036±0.01 N/A N/A N/A 1.856±0.96 0.061±0.02 1.375±0.51

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