C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serologically defined colon cancer antigen 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165689 SDCCAG3 9606 - 9:136401922-136410609 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298537 SDCCAG3-001 136401925-136410609 protein_coding
  ENST00000357365 SDCCAG3-002 136401922-136410527 protein_coding
  ENST00000371723 SDCCAG3-004 136407145-136410593 protein_coding
  ENST00000371725 SDCCAG3-003 136401951-136410600 protein_coding
  ENST00000417512 SDCCAG3-007 136402665-136407185 protein_coding
  ENST00000446833 SDCCAG3-006 136407875-136410268 protein_coding
  ENST00000461693 SDCCAG3-011 136402480-136405348 processed_transcript
  ENST00000466579 SDCCAG3-010 136402682-136404780 processed_transcript
  ENST00000468963 SDCCAG3-009 136407017-136407966 processed_transcript
  ENST00000481114 SDCCAG3-012 136402644-136404108 processed_transcript
  ENST00000486441 SDCCAG3-008 136404110-136407208 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298537ENST00000357365ENST00000371725
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298537 N/A N/A 3.030±0.00 N/A N/A N/A 5.184±0.00 N/A N/A 1.978±0.00 N/A N/A
ENST00000357365 N/A N/A N/A N/A N/A 6.530±0.00 N/A N/A N/A N/A N/A N/A
ENST00000371725 6.308±0.00 16.028±0.00 4.076±2.66 7.410±0.00 4.613±0.00 5.391±0.00 10.267±0.00 6.757±0.00 3.504±1.99 15.938±11.65 9.218±4.02 26.695±18.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0002 CGP 9:136375577-136410609
CIL_00034J CIL_00034J_0001 CGP 9:136401922-136423761

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095515 sdccag3 serologically defined colon cancer antigen 3 protein_coding Danio_rerio
ENSMUSG00000026927 Sdccag3 serologically defined colon cancer antigen 3 protein_coding Mus_musculus

Loading