C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: growth factor independent 1B transcription repressor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165702 GFI1B 9606 + 9:132945551-132991696 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339463 GFI1B-003 132945551-132991687 protein_coding
  ENST00000372122 GFI1B-002 132986656-132991687 protein_coding
  ENST00000372123 GFI1B-001 132986656-132991687 protein_coding
  ENST00000534944 GFI1B-201 132978711-132991696 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339463ENST00000372122ENST00000372123ENST00000534944
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339463 0.111±0.00 0.139±0.00 0.060±0.00 N/A 0.081±0.00 0.057±0.00 0.017±0.00 N/A N/A 0.224±0.22 0.087±0.03 0.174±0.00
ENST00000372122 0.062±0.00 N/A N/A 0.094±0.00 N/A N/A N/A 1.245±0.00 N/A 0.051±0.00 0.175±0.04 0.215±0.00
ENST00000372123 N/A N/A N/A N/A N/A 0.065±0.00 0.012±0.00 0.423±0.00 0.892±0.00 0.045±0.00 0.347±0.00 N/A
ENST00000534944 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007275 IEA multicellular organismal development
GO:0008283 TAS cell proliferation
GO:0016363 IDA nuclear matrix
GO:0016568 IEA chromatin modification
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079947 gfi1b growth factor independent 1B transcription repressor protein_coding Danio_rerio
ENSMUSG00000026815 Gfi1b growth factor independent 1B protein_coding Mus_musculus

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