C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth factor independent 1B transcription repressor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339463 GFI1B-003 ENSG00000165702 9606 + 9:132945551-132991687 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLiverOvaryPlacentaTestisENST00000339463
Transcript ID Adipose Adrenal Brain Heart Kidney Liver Ovary Placenta Testis
ENST00000339463 0.111±0.00 0.139±0.00 0.060±0.00 0.081±0.00 0.057±0.00 0.017±0.00 0.224±0.22 0.087±0.03 0.174±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007275 IEA multicellular organismal development
GO:0008283 TAS cell proliferation
GO:0016363 IDA nuclear matrix
GO:0016568 IEA chromatin modification
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028156 Gfi1b-001 protein_coding Mus_musculus 0 1050
ENSMUST00000164290 Gfi1b-201 protein_coding Mus_musculus 0 507

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