C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, FYVE domain containing 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166140 ZFYVE19 9606 + 15:40807086-40815084 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299173 ZFYVE19-008 40807590-40814569 protein_coding
  ENST00000336455 ZFYVE19-005 40807234-40814569 protein_coding
  ENST00000355341 ZFYVE19-001 40807089-40815084 protein_coding
  ENST00000560078 ZFYVE19-004 40808121-40814569 retained_intron
  ENST00000561617 ZFYVE19-016 40807757-40812902 protein_coding
  ENST00000561768 ZFYVE19-007 40807768-40814521 nonsense_mediated_decay
  ENST00000563497 ZFYVE19-020 40813663-40814322 retained_intron
  ENST00000563530 ZFYVE19-014 40807660-40809185 processed_transcript
  ENST00000564258 ZFYVE19-006 40807089-40814565 protein_coding
  ENST00000566407 ZFYVE19-012 40807677-40813800 protein_coding
  ENST00000566767 ZFYVE19-018 40808919-40810195 protein_coding
  ENST00000567756 ZFYVE19-015 40807734-40810683 nonsense_mediated_decay
  ENST00000568062 ZFYVE19-013 40807642-40810099 nonsense_mediated_decay
  ENST00000569057 ZFYVE19-017 40807763-40814064 nonsense_mediated_decay
  ENST00000570108 ZFYVE19-011 40807086-40814345 protein_coding
  ENST00000570162 ZFYVE19-010 40810081-40811074 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000299173ENST00000355341ENST00000560078ENST00000561617ENST00000561768ENST00000564258ENST00000569057ENST00000570108
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000299173 N/A N/A N/A N/A N/A 2.599±0.00 N/A N/A 2.372±0.00 12.824±0.00 6.144±1.43 N/A
ENST00000355341 N/A N/A N/A N/A 1.708±0.00 N/A N/A N/A 0.541±0.00 N/A N/A N/A
ENST00000560078 N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A N/A 4.117±0.00 N/A 1.983±0.00
ENST00000561617 N/A N/A N/A N/A 8.652±0.00 N/A N/A N/A N/A N/A N/A 6.671±0.00
ENST00000561768 N/A N/A N/A N/A 4.198±0.00 2.236±1.27 5.000±2.58 N/A 4.065±0.00 10.857±0.00 6.708±1.46 5.910±0.00
ENST00000564258 7.066±0.00 3.739±0.00 5.595±0.00 6.963±0.00 4.580±0.00 2.120±0.00 6.980±0.00 7.625±0.00 N/A 12.494±0.00 6.711±2.80 5.226±0.34
ENST00000569057 N/A N/A N/A N/A 2.694±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000570108 N/A N/A N/A N/A N/A N/A 2.108±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070D CIL_00070D_0001 CGP 15:40764020-40807477
CIL_000793 CIL_000793_0001 CGP 15:40765155-40807477
CIL_000792 CIL_000792_0001 CGP 15:40770080-40815084
CIL_000795 CIL_000795_0001 CGP 15:40807086-40828709

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0008270 IEA zinc ion binding
GO:0009838 IMP abscission
GO:0030496 IDA midbody
GO:0031565 IMP cytokinesis checkpoint
GO:0032154 IDA cleavage furrow
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0032466 IMP negative regulation of cytokinesis
GO:0046872 IEA metal ion binding
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003642 zfyve19 zinc finger, FYVE domain containing 19 protein_coding Danio_rerio
ENSMUSG00000068580 Zfyve19 zinc finger, FYVE domain containing 19 protein_coding Mus_musculus

Loading