C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000792_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188277-ENSG00000166140 CGP 9606 15:40770080-40815084
GeneTranscriptPositionBiotype
ENSG00000104129 (DNAJC17)
DnaJ (Hsp40) homolog, subfamily C, member 17 		ENST00000220496 (DNAJC17-001) 40765155-40807477 protein_coding
ENST00000558727 (DNAJC17-010) 40767913-40770289 processed_transcript
ENST00000558769 (DNAJC17-008) 40775577-40776886 retained_intron
ENST00000559238 (DNAJC17-005) 40767878-40807473 nonsense_mediated_decay
ENST00000559310 (DNAJC17-006) 40774365-40807457 nonsense_mediated_decay
ENST00000560065 (DNAJC17-011) 40774253-40807452 nonsense_mediated_decay
ENST00000560301 (DNAJC17-002) 40775258-40807477 retained_intron
ENST00000560645 (DNAJC17-004) 40773782-40807473 nonsense_mediated_decay
ENST00000561018 (DNAJC17-003) 40774356-40807473 nonsense_mediated_decay
ENST00000561044 (DNAJC17-007) 40779554-40780567 processed_transcript
ENST00000561110 (DNAJC17-009) 40767873-40775621 retained_intron
ENSG00000166140 (ZFYVE19)
zinc finger, FYVE domain containing 19 		ENST00000299173 (ZFYVE19-008) 40807590-40814569 protein_coding
ENST00000336455 (ZFYVE19-005) 40807234-40814569 protein_coding
ENST00000355341 (ZFYVE19-001) 40807089-40815084 protein_coding
ENST00000560078 (ZFYVE19-004) 40808121-40814569 retained_intron
ENST00000561617 (ZFYVE19-016) 40807757-40812902 protein_coding
ENST00000561768 (ZFYVE19-007) 40807768-40814521 nonsense_mediated_decay
ENST00000563497 (ZFYVE19-020) 40813663-40814322 retained_intron
ENST00000563530 (ZFYVE19-014) 40807660-40809185 processed_transcript
ENST00000564258 (ZFYVE19-006) 40807089-40814565 protein_coding
ENST00000566407 (ZFYVE19-012) 40807677-40813800 protein_coding
ENST00000566767 (ZFYVE19-018) 40808919-40810195 protein_coding
ENST00000567756 (ZFYVE19-015) 40807734-40810683 nonsense_mediated_decay
ENST00000568062 (ZFYVE19-013) 40807642-40810099 nonsense_mediated_decay
ENST00000569057 (ZFYVE19-017) 40807763-40814064 nonsense_mediated_decay
ENST00000570108 (ZFYVE19-011) 40807086-40814345 protein_coding
ENST00000570162 (ZFYVE19-010) 40810081-40811074 retained_intron
ENSG00000188277 (C15orf62)
chromosome 15 open reading frame 62 		ENST00000344320 (C15orf62-002) 40770080-40772449 protein_coding
ENSG00000276198 (AC012476.1)
 ENST00000612414 (AC012476.1-201) 40810282-40810373 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000792_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055926-ENSMUSG00000068580 CGP 10090 2:119174509-119217049
GeneTranscriptPositionBiotype
ENSMUSG00000034278 (Dnajc17)
DnaJ (Hsp40) homolog, subfamily C, member 17 		ENSMUST00000038439 (Dnajc17-001) 119172500-119208795 protein_coding
ENSMUST00000125731 (Dnajc17-002) 119183865-119208782 retained_intron
ENSMUST00000141009 (Dnajc17-003) 119179395-119183827 processed_transcript
ENSMUSG00000055926 (Gm14137)
predicted gene 14137 		ENSMUST00000069711 (Gm14137-001) 119174509-119177575 protein_coding
ENSMUSG00000068580 (Zfyve19)
zinc finger, FYVE domain containing 19 		ENSMUST00000090174 (Zfyve19-001) 119208634-119217049 protein_coding
ENSMUST00000102519 (Zfyve19-002) 119209027-119217049 protein_coding
ENSMUST00000123323 (Zfyve19-010) 119214456-119216397 retained_intron
ENSMUST00000123776 (Zfyve19-006) 119209041-119211144 retained_intron
ENSMUST00000141514 (Zfyve19-005) 119209032-119211766 processed_transcript
ENSMUST00000142644 (Zfyve19-004) 119209012-119210603 processed_transcript
ENSMUST00000147584 (Zfyve19-011) 119216265-119217049 retained_intron
ENSMUST00000149036 (Zfyve19-003) 119208617-119210540 processed_transcript
ENSMUST00000153349 (Zfyve19-008) 119211463-119211720 processed_transcript
ENSMUST00000154057 (Zfyve19-007) 119210839-119214889 retained_intron
ENSMUST00000154185 (Zfyve19-009) 119211642-119214911 retained_intron
ENSMUSG00000081572 (Gm14138)
predicted gene 14138 		ENSMUST00000122061 (Gm14138-001) 119187517-119188261 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000792_0001ENSG00000104129ENST00000220496ENST00000558769ENST00000559310ENST00000561110ENSG00000166140ENST00000299173ENST00000355341ENST00000560078ENST00000561617ENST00000561768ENST00000564258ENST00000569057ENST00000570108ENSG00000188277ENST00000344320ENSG00000276198ENST00000612414CIL_000792_0002ENSMUSG00000034278ENSMUST00000038439ENSMUSG00000055926ENSMUST00000069711ENSMUSG00000068580ENSMUST00000090174ENSMUST00000102519ENSMUST00000154185ENSMUSG00000081572ENSMUST00000122061
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104129 ENST00000220496 5.564±0.00 2.641±0.00 N/A 1.795±0.97 3.956±0.00 1.287±0.51 0.694±0.35 4.172±0.00 4.457±3.92 6.313±0.00 0.646±0.00 4.320±2.19 4.188±0.96 1.896±0.68
ENST00000558727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558769 N/A N/A 3.121±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559310 N/A N/A N/A 4.061±0.00 2.942±0.00 N/A 1.015±0.00 N/A N/A 2.198±0.00 N/A N/A N/A N/A
ENST00000560065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561110 N/A 12.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166140 ENST00000299173 N/A N/A N/A N/A N/A N/A 2.599±0.00 N/A N/A N/A 2.372±0.00 12.824±0.00 6.144±1.43 N/A
ENST00000336455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000355341 N/A N/A N/A N/A N/A 1.708±0.00 N/A N/A N/A N/A 0.541±0.00 N/A N/A N/A
ENST00000560078 N/A N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A N/A N/A 4.117±0.00 N/A 1.983±0.00
ENST00000561617 N/A N/A N/A N/A N/A 8.652±0.00 N/A N/A N/A N/A N/A N/A N/A 6.671±0.00
ENST00000561768 N/A N/A N/A N/A N/A 4.198±0.00 2.236±1.27 5.000±2.58 N/A N/A 4.065±0.00 10.857±0.00 6.708±1.46 5.910±0.00
ENST00000563497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564258 7.066±0.00 3.739±0.00 N/A 5.595±0.00 6.963±0.00 4.580±0.00 2.120±0.00 6.980±0.00 N/A 7.625±0.00 N/A 12.494±0.00 6.711±2.80 5.226±0.34
ENST00000566407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569057 N/A N/A N/A N/A N/A 2.694±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570108 N/A N/A N/A N/A N/A N/A N/A 2.108±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188277 ENST00000344320 N/A N/A N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000276198 ENST00000612414 N/A N/A N/A N/A N/A N/A N/A N/A 0.585±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034278 ENSMUST00000038439 N/A 5.496±0.00 13.042±2.71 11.938±0.63 N/A N/A N/A N/A 8.151±2.19 N/A 4.490±0.33 13.786±4.61 13.933±7.36 7.207±0.00
ENSMUST00000125731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000055926 ENSMUST00000069711 0.777±0.28 0.960±0.10 0.613±0.00 0.858±0.06 0.804±0.18 1.156±0.23 0.218±0.09 0.414±0.09 0.172±0.08 0.935±0.31 0.215±0.05 0.920±0.18 0.269±0.06 2.651±0.24
ENSMUSG00000068580 ENSMUST00000090174 12.959±1.82 6.878±0.40 10.378±2.20 9.738±1.18 8.417±3.80 13.428±3.33 5.285±1.03 12.593±2.38 7.793±1.35 10.076±1.89 3.341±0.39 12.767±4.94 7.712±1.42 13.856±4.48
ENSMUST00000102519 4.663±0.59 5.060±0.50 N/A N/A 2.283±0.59 7.308±1.02 1.784±0.00 3.789±0.30 3.943±0.93 3.523±0.00 1.911±0.59 7.975±2.15 6.552±2.33 N/A
ENSMUST00000123323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154185 N/A 9.888±0.73 N/A 19.639±0.00 3.933±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081572 ENSMUST00000122061 0.172±0.10 0.227±0.06 0.067±0.05 0.079±0.04 N/A 0.113±0.00 0.057±0.00 0.092±0.04 0.087±0.05 0.075±0.00 0.191±0.07 0.367±0.02 0.142±0.15 N/A

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