C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, FYVE domain containing 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068580 Zfyve19 10090 + 2:119208617-119217049 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090174 Zfyve19-001 119208634-119217049 protein_coding
  ENSMUST00000102519 Zfyve19-002 119209027-119217049 protein_coding
  ENSMUST00000123323 Zfyve19-010 119214456-119216397 retained_intron
  ENSMUST00000123776 Zfyve19-006 119209041-119211144 retained_intron
  ENSMUST00000141514 Zfyve19-005 119209032-119211766 processed_transcript
  ENSMUST00000142644 Zfyve19-004 119209012-119210603 processed_transcript
  ENSMUST00000147584 Zfyve19-011 119216265-119217049 retained_intron
  ENSMUST00000149036 Zfyve19-003 119208617-119210540 processed_transcript
  ENSMUST00000153349 Zfyve19-008 119211463-119211720 processed_transcript
  ENSMUST00000154057 Zfyve19-007 119210839-119214889 retained_intron
  ENSMUST00000154185 Zfyve19-009 119211642-119214911 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090174ENSMUST00000102519ENSMUST00000154185
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090174 12.959±1.82 6.878±0.40 10.378±2.20 9.738±1.18 8.417±3.80 13.428±3.33 5.285±1.03 12.593±2.38 7.793±1.35 10.076±1.89 3.341±0.39 12.767±4.94 7.712±1.42 13.856±4.48
ENSMUST00000102519 4.663±0.59 5.060±0.50 N/A N/A 2.283±0.59 7.308±1.02 1.784±0.00 3.789±0.30 3.943±0.93 3.523±0.00 1.911±0.59 7.975±2.15 6.552±2.33 N/A
ENSMUST00000154185 N/A 9.888±0.73 N/A 19.639±0.00 3.933±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070D CIL_00070D_0002 CGP 2:119167773-119208795
CIL_000793 CIL_000793_0002 CGP 2:119172500-119208795
CIL_000792 CIL_000792_0002 CGP 2:119174509-119217049
CIL_000795 CIL_000795_0002 CGP 2:119208617-119229906

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0008270 IEA zinc ion binding
GO:0009838 ISS abscission
GO:0030496 ISS midbody
GO:0031565 ISS cytokinesis checkpoint
GO:0032154 ISS cleavage furrow
GO:0032266 ISS phosphatidylinositol-3-phosphate binding
GO:0032466 ISS negative regulation of cytokinesis
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003642 zfyve19 zinc finger, FYVE domain containing 19 protein_coding Danio_rerio
ENSG00000166140 ZFYVE19 zinc finger, FYVE domain containing 19 protein_coding Homo_sapiens

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