C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin binding protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166263 STXBP4 9606 + 17:54968727-55173632 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376352 STXBP4-001 54968765-55173632 protein_coding
  ENST00000398391 STXBP4-003 54968795-55044776 protein_coding
  ENST00000405898 STXBP4-007 54968775-55044776 protein_coding
  ENST00000434978 STXBP4-008 54968776-55160926 protein_coding
  ENST00000461444 STXBP4-004 54968727-54990988 retained_intron
  ENST00000463234 STXBP4-006 54999816-55043366 protein_coding
  ENST00000464340 STXBP4-002 54968792-54991852 retained_intron
  ENST00000468837 STXBP4-005 55030807-55043375 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000376352
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000376352 0.452±0.00 0.442±0.00 1.718±0.00 0.516±0.14 1.040±0.00 0.340±0.09 1.591±0.00 1.325±0.00 1.097±0.00 0.925±0.21 0.241±0.03 1.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X1 CIL_0004X1_0002 CGP 17:54951902-55173632
CIL_0004WY CIL_0004WY_0002 CGP 17:54968727-55325065

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006605 IEA protein targeting
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008286 IEA insulin receptor signaling pathway
GO:0010838 IMP positive regulation of keratinocyte proliferation
GO:0015758 IEA glucose transport
GO:0045111 IDA intermediate filament cytoskeleton
GO:0050821 IMP protein stabilization
GO:0070062 IDA extracellular vesicular exosome
GO:1902808 IMP positive regulation of cell cycle G1/S phase transition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076997 stxbp4 syntaxin binding protein 4 protein_coding Danio_rerio
ENSMUSG00000020546 Stxbp4 syntaxin binding protein 4 protein_coding Mus_musculus

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