C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004X1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061004-ENSDARG00000076997 CGP 7955 12:33755395-33835397
GeneTranscriptPositionBiotype
ENSDARG00000061004 (cox11)
COX11 cytochrome c oxidase assembly homolog (yeast) 		ENSDART00000086531 (cox11-001) 33755395-33760720 protein_coding
ENSDART00000153369 (cox11-002) 33755904-33760712 protein_coding
ENSDARG00000076997 (stxbp4)
syntaxin binding protein 4 		ENSDART00000111615 (stxbp4-201) 33765272-33835397 protein_coding
ENSDART00000152924 (stxbp4-003) 33765157-33777437 protein_coding
ENSDART00000152957 (stxbp4-004) 33765169-33769244 retained_intron
ENSDART00000153245 (stxbp4-001) 33760761-33833082 protein_coding
ENSDART00000153268 (stxbp4-002) 33760771-33772706 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004X1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166260-ENSG00000166263 CGP 9606 17:54951902-55173632
GeneTranscriptPositionBiotype
ENSG00000166260 (COX11)
cytochrome c oxidase assembly homolog 11 (yeast) 		ENST00000299335 (COX11-001) 54961206-54968785 protein_coding
ENST00000571584 (COX11-002) 54962903-54968703 protein_coding
ENST00000572088 (COX11-004) 54951906-54955149 retained_intron
ENST00000572558 (COX11-005) 54951909-54968654 nonsense_mediated_decay
ENST00000573912 (COX11-007) 54951906-54961265 processed_transcript
ENST00000574821 (COX11-006) 54951935-54963414 nonsense_mediated_decay
ENST00000574989 (COX11-008) 54959201-54961139 processed_transcript
ENST00000576084 (COX11-009) 54951906-54954105 retained_intron
ENST00000576370 (COX11-003) 54951902-54968653 nonsense_mediated_decay
ENSG00000166263 (STXBP4)
syntaxin binding protein 4 		ENST00000376352 (STXBP4-001) 54968765-55173632 protein_coding
ENST00000398391 (STXBP4-003) 54968795-55044776 protein_coding
ENST00000405898 (STXBP4-007) 54968775-55044776 protein_coding
ENST00000434978 (STXBP4-008) 54968776-55160926 protein_coding
ENST00000461444 (STXBP4-004) 54968727-54990988 retained_intron
ENST00000463234 (STXBP4-006) 54999816-55043366 protein_coding
ENST00000464340 (STXBP4-002) 54968792-54991852 retained_intron
ENST00000468837 (STXBP4-005) 55030807-55043375 retained_intron
ENSG00000275710 (RP11-257O5.4)
 ENST00000616755 (RP11-257O5.4-001) 54964474-54964679 antisense
ENSG00000279059 (RP11-257O5.2)
 ENST00000623493 (RP11-257O5.2-001) 54956760-54958426 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X1_0001ENSDARG00000061004ENSDART00000086531ENSDART00000153369ENSDARG00000076997ENSDART00000111615ENSDART00000152924ENSDART00000152957ENSDART00000153245ENSDART00000153268CIL_0004X1_0002ENSG00000166260ENST00000299335ENST00000571584ENST00000572088ENST00000572558ENST00000573912ENST00000574821ENST00000574989ENST00000576084ENST00000576370ENSG00000166263ENST00000376352ENST00000398391ENST00000405898ENST00000434978ENST00000461444ENST00000463234ENST00000464340ENST00000468837ENSG00000275710ENST00000616755ENSG00000279059ENST00000623493
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X1_0001ENSDARG00000061004ENSDART00000086531ENSDART00000153369ENSDARG00000076997ENSDART00000111615ENSDART00000153245ENSDART00000153268CIL_0004X1_0002ENSG00000166260ENST00000299335ENST00000571584ENST00000572088ENST00000572558ENST00000576370ENSG00000166263ENST00000376352ENSG00000275710ENST00000616755ENSG00000279059ENST00000623493
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061004 ENSDART00000086531 N/A N/A N/A 4.605±1.84 N/A N/A 5.961±1.57 5.485±1.58 0.990±0.00 N/A 2.827±0.00 N/A N/A N/A
ENSDART00000153369 N/A N/A N/A N/A N/A N/A 3.466±0.77 N/A 0.241±0.00 N/A 0.791±0.00 N/A N/A N/A
ENSDARG00000076997 ENSDART00000111615 N/A N/A N/A 1.851±0.50 N/A N/A 0.052±0.03 0.034±0.01 N/A N/A N/A N/A N/A N/A
ENSDART00000152924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153245 N/A N/A N/A N/A N/A N/A 0.073±0.05 0.163±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000153268 N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166260 ENST00000299335 7.509±0.00 9.593±0.00 8.243±0.00 9.875±4.22 5.171±1.39 9.657±0.90 6.120±2.46 13.122±4.17 8.027±2.60 5.855±0.60 5.640±2.26 7.644±1.46 5.322±1.80 8.287±0.78
ENST00000571584 N/A N/A N/A N/A N/A N/A 3.719±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000572088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.194±0.00 N/A N/A
ENST00000572558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.293±0.00 N/A 5.618±0.00 20.254±0.00
ENST00000573912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576370 N/A N/A N/A 4.567±0.00 N/A N/A N/A N/A N/A N/A N/A 5.254±0.00 N/A N/A
ENSG00000166263 ENST00000376352 0.452±0.00 0.442±0.00 1.718±0.00 N/A 0.516±0.14 1.040±0.00 0.340±0.09 1.591±0.00 1.325±0.00 1.097±0.00 N/A 0.925±0.21 0.241±0.03 1.028±0.00
ENST00000398391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275710 ENST00000616755 0.046±0.00 0.331±0.00 N/A N/A 0.145±0.00 N/A N/A 0.231±0.00 0.137±0.00 0.491±0.00 N/A 0.213±0.00 N/A N/A
ENSG00000279059 ENST00000623493 0.767±0.00 1.478±0.00 2.310±0.00 3.712±2.05 0.900±0.11 2.044±0.83 0.780±0.37 2.324±0.04 0.868±0.03 0.888±0.06 0.592±0.54 2.412±0.96 0.557±0.14 1.927±0.65

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