C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398391 STXBP4-003 ENSG00000166263 9606 + 17:54968795-55044776 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X1 CIL_0004X1_0002 CGP 17:54951902-55173632
CIL_0004WY CIL_0004WY_0002 CGP 17:54968727-55325065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0010838 IMP positive regulation of keratinocyte proliferation
GO:0045111 IDA intermediate filament cytoskeleton
GO:0050821 IMP protein stabilization
GO:0070062 IDA extracellular vesicular exosome
GO:1902808 IMP positive regulation of cell cycle G1/S phase transition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020858 Stxbp4-004 protein_coding Mus_musculus 0 556
ENSMUST00000143203 Stxbp4-001 protein_coding Mus_musculus 0 556
ENSMUST00000107875 Stxbp4-003 protein_coding Mus_musculus 0 307
ENSMUST00000107872 Stxbp4-002 protein_coding Mus_musculus 0 241

Loading