C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: suppression of tumorigenicity 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166444 ST5 9606 - 11:8693351-8910951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313726 ST5-006 8693352-8810840 protein_coding
  ENST00000357665 ST5-201 8693355-8839355 protein_coding
  ENST00000524513 ST5-058 8694062-8695995 retained_intron
  ENST00000524757 ST5-019 8731118-8871367 protein_coding
  ENST00000525169 ST5-016 8731170-8871370 protein_coding
  ENST00000526057 ST5-021 8715723-8871079 protein_coding
  ENST00000526062 ST5-055 8696465-8702657 nonsense_mediated_decay
  ENST00000526099 ST5-009 8693748-8718477 protein_coding
  ENST00000526126 ST5-024 8726073-8871007 protein_coding
  ENST00000526155 ST5-020 8730917-8871353 protein_coding
  ENST00000526221 ST5-043 8730305-8766670 processed_transcript
  ENST00000526241 ST5-040 8730864-8870984 protein_coding
  ENST00000526701 ST5-010 8699966-8711185 retained_intron
  ENST00000526757 ST5-004 8693351-8811341 protein_coding
  ENST00000526828 ST5-030 8731133-8831939 protein_coding
  ENST00000526837 ST5-050 8703399-8711185 processed_transcript
  ENST00000527347 ST5-022 8730955-8870917 protein_coding
  ENST00000527392 ST5-018 8731130-8871367 protein_coding
  ENST00000527473 ST5-031 8731040-8811566 protein_coding
  ENST00000527510 ST5-045 8715755-8810649 protein_coding
  ENST00000527516 ST5-015 8731005-8871389 protein_coding
  ENST00000527540 ST5-052 8693873-8694655 protein_coding
  ENST00000527870 ST5-059 8717832-8726319 retained_intron
  ENST00000527930 ST5-038 8730831-8766712 protein_coding
  ENST00000528196 ST5-044 8715742-8774245 protein_coding
  ENST00000528452 ST5-029 8830701-8832587 processed_transcript
  ENST00000528523 ST5-042 8730828-8810685 protein_coding
  ENST00000528527 ST5-034 8712600-8810673 protein_coding
  ENST00000529940 ST5-032 8730808-8835667 processed_transcript
  ENST00000530338 ST5-051 8707103-8712720 nonsense_mediated_decay
  ENST00000530438 ST5-005 8694096-8811016 protein_coding
  ENST00000530559 ST5-049 8702572-8715830 retained_intron
  ENST00000530580 ST5-035 8715781-8794842 protein_coding
  ENST00000530593 ST5-047 8711122-8726174 protein_coding
  ENST00000530922 ST5-054 8702570-8702856 processed_transcript
  ENST00000530938 ST5-023 8731068-8871066 protein_coding
  ENST00000530959 ST5-027 8730871-8835708 protein_coding
  ENST00000530991 ST5-008 8693353-8719143 protein_coding
  ENST00000531060 ST5-060 8715463-8717836 protein_coding
  ENST00000531093 ST5-041 8717879-8771919 protein_coding
  ENST00000531237 ST5-003 8807826-8811580 processed_transcript
  ENST00000531578 ST5-026 8750621-8835708 protein_coding
  ENST00000531640 ST5-012 8811283-8909911 processed_transcript
  ENST00000532162 ST5-056 8693889-8699020 retained_intron
  ENST00000532651 ST5-014 8717794-8871416 processed_transcript
  ENST00000532734 ST5-007 8707206-8766704 nonsense_mediated_decay
  ENST00000532738 ST5-057 8696436-8697773 retained_intron
  ENST00000532871 ST5-061 8697576-8707266 retained_intron
  ENST00000533016 ST5-036 8730981-8776679 protein_coding
  ENST00000533020 ST5-048 8702674-8718060 protein_coding
  ENST00000533081 ST5-053 8697924-8707225 protein_coding
  ENST00000533225 ST5-025 8717882-8835711 protein_coding
  ENST00000533425 ST5-046 8715644-8810685 processed_transcript
  ENST00000533471 ST5-013 8731068-8871418 protein_coding
  ENST00000533580 ST5-039 8730875-8757152 protein_coding
  ENST00000533681 ST5-037 8730857-8774301 protein_coding
  ENST00000534127 ST5-001 8693351-8910951 protein_coding
  ENST00000534248 ST5-028 8730922-8835705 protein_coding
  ENST00000534278 ST5-011 8693899-8708081 protein_coding
  ENST00000534665 ST5-017 8731200-8871367 protein_coding
  ENST00000534783 ST5-033 8730842-8810747 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryTestisENST00000313726ENST00000357665ENST00000532162
Transcript ID Colon Ovary Testis
ENST00000313726 4.251±0.00 52.348±0.00 N/A
ENST00000357665 N/A N/A 7.634±0.00
ENST00000532162 N/A N/A 56.907±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_00049H CIL_00049H_0001 CGP 11:8612037-8714759
CIL_00049E CIL_00049E_0001 CGP 11:8682411-8910951
CIL_00049F CIL_00049F_0001 CGP 11:8693351-8920084

Gene Ontology

GO IDEvidence TypeGO Description
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037363 st5 suppression of tumorigenicity 5 protein_coding Danio_rerio
ENSMUSG00000031024 St5 suppression of tumorigenicity 5 protein_coding Mus_musculus

Loading