C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166441-ENSG00000166444 CGP 9606 11:8682411-8910951
GeneTranscriptPositionBiotype
ENSG00000166441 (RPL27A)
ribosomal protein L27a 		ENST00000314138 (RPL27A-001) 8682411-8689872 protein_coding
ENST00000524496 (RPL27A-007) 8682789-8685847 protein_coding
ENST00000525981 (RPL27A-010) 8683215-8685847 protein_coding
ENST00000526562 (RPL27A-009) 8683201-8685848 protein_coding
ENST00000529227 (RPL27A-002) 8682788-8683779 retained_intron
ENST00000530022 (RPL27A-008) 8682810-8685848 protein_coding
ENST00000530585 (RPL27A-003) 8682788-8684489 retained_intron
ENST00000530913 (RPL27A-011) 8684259-8685848 protein_coding
ENST00000531102 (RPL27A-012) 8689130-8714759 processed_transcript
ENST00000531978 (RPL27A-004) 8682788-8685415 protein_coding
ENST00000532359 (RPL27A-006) 8682792-8685848 protein_coding
ENST00000534599 (RPL27A-005) 8682792-8685845 nonsense_mediated_decay
ENSG00000166444 (ST5)
suppression of tumorigenicity 5 		ENST00000313726 (ST5-006) 8693352-8810840 protein_coding
ENST00000357665 (ST5-201) 8693355-8839355 protein_coding
ENST00000524513 (ST5-058) 8694062-8695995 retained_intron
ENST00000524757 (ST5-019) 8731118-8871367 protein_coding
ENST00000525169 (ST5-016) 8731170-8871370 protein_coding
ENST00000526057 (ST5-021) 8715723-8871079 protein_coding
ENST00000526062 (ST5-055) 8696465-8702657 nonsense_mediated_decay
ENST00000526099 (ST5-009) 8693748-8718477 protein_coding
ENST00000526126 (ST5-024) 8726073-8871007 protein_coding
ENST00000526155 (ST5-020) 8730917-8871353 protein_coding
ENST00000526221 (ST5-043) 8730305-8766670 processed_transcript
ENST00000526241 (ST5-040) 8730864-8870984 protein_coding
ENST00000526701 (ST5-010) 8699966-8711185 retained_intron
ENST00000526757 (ST5-004) 8693351-8811341 protein_coding
ENST00000526828 (ST5-030) 8731133-8831939 protein_coding
ENST00000526837 (ST5-050) 8703399-8711185 processed_transcript
ENST00000527347 (ST5-022) 8730955-8870917 protein_coding
ENST00000527392 (ST5-018) 8731130-8871367 protein_coding
ENST00000527473 (ST5-031) 8731040-8811566 protein_coding
ENST00000527510 (ST5-045) 8715755-8810649 protein_coding
ENST00000527516 (ST5-015) 8731005-8871389 protein_coding
ENST00000527540 (ST5-052) 8693873-8694655 protein_coding
ENST00000527870 (ST5-059) 8717832-8726319 retained_intron
ENST00000527930 (ST5-038) 8730831-8766712 protein_coding
ENST00000528196 (ST5-044) 8715742-8774245 protein_coding
ENST00000528452 (ST5-029) 8830701-8832587 processed_transcript
ENST00000528523 (ST5-042) 8730828-8810685 protein_coding
ENST00000528527 (ST5-034) 8712600-8810673 protein_coding
ENST00000529940 (ST5-032) 8730808-8835667 processed_transcript
ENST00000530338 (ST5-051) 8707103-8712720 nonsense_mediated_decay
ENST00000530438 (ST5-005) 8694096-8811016 protein_coding
ENST00000530559 (ST5-049) 8702572-8715830 retained_intron
ENST00000530580 (ST5-035) 8715781-8794842 protein_coding
ENST00000530593 (ST5-047) 8711122-8726174 protein_coding
ENST00000530922 (ST5-054) 8702570-8702856 processed_transcript
ENST00000530938 (ST5-023) 8731068-8871066 protein_coding
ENST00000530959 (ST5-027) 8730871-8835708 protein_coding
ENST00000530991 (ST5-008) 8693353-8719143 protein_coding
ENST00000531060 (ST5-060) 8715463-8717836 protein_coding
ENST00000531093 (ST5-041) 8717879-8771919 protein_coding
ENST00000531237 (ST5-003) 8807826-8811580 processed_transcript
ENST00000531578 (ST5-026) 8750621-8835708 protein_coding
ENST00000531640 (ST5-012) 8811283-8909911 processed_transcript
ENST00000532162 (ST5-056) 8693889-8699020 retained_intron
ENST00000532651 (ST5-014) 8717794-8871416 processed_transcript
ENST00000532734 (ST5-007) 8707206-8766704 nonsense_mediated_decay
ENST00000532738 (ST5-057) 8696436-8697773 retained_intron
ENST00000532871 (ST5-061) 8697576-8707266 retained_intron
ENST00000533016 (ST5-036) 8730981-8776679 protein_coding
ENST00000533020 (ST5-048) 8702674-8718060 protein_coding
ENST00000533081 (ST5-053) 8697924-8707225 protein_coding
ENST00000533225 (ST5-025) 8717882-8835711 protein_coding
ENST00000533425 (ST5-046) 8715644-8810685 processed_transcript
ENST00000533471 (ST5-013) 8731068-8871418 protein_coding
ENST00000533580 (ST5-039) 8730875-8757152 protein_coding
ENST00000533681 (ST5-037) 8730857-8774301 protein_coding
ENST00000534127 (ST5-001) 8693351-8910951 protein_coding
ENST00000534248 (ST5-028) 8730922-8835705 protein_coding
ENST00000534278 (ST5-011) 8693899-8708081 protein_coding
ENST00000534665 (ST5-017) 8731200-8871367 protein_coding
ENST00000534783 (ST5-033) 8730842-8810747 processed_transcript
ENSG00000202276 (Y_RNA)
Y RNA 		ENST00000365406 (Y_RNA.1-551) 8877417-8877518 misc_RNA
ENSG00000212607 (SNORA45B)
small nucleolar RNA, H/ACA box 45B 		ENST00000391305 (SNORA45B-201) 8685439-8685569 snoRNA
ENSG00000254665 (RP11-152H18.3)
 ENST00000529883 (RP11-152H18.3-001) 8693357-8696607 antisense

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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CIL_00049E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046364-ENSMUSG00000031024 CGP 10090 7:109519147-109617147
GeneTranscriptPositionBiotype
ENSMUSG00000031024 (St5)
suppression of tumorigenicity 5 		ENSMUST00000077909 (St5-201) 109523920-109616568 protein_coding
ENSMUST00000079282 (St5-202) 109523911-109617147 protein_coding
ENSMUST00000084738 (St5-203) 109523920-109616568 protein_coding
ENSMUST00000168005 (St5-204) 109523911-109617147 protein_coding
ENSMUSG00000046364 (Rpl27a)
ribosomal protein L27A 		ENSMUST00000053298 (Rpl27a-005) 109519213-109521766 retained_intron
ENSMUST00000132877 (Rpl27a-002) 109519196-109521153 retained_intron
ENSMUST00000143107 (Rpl27a-001) 109519147-109522367 protein_coding
ENSMUST00000149143 (Rpl27a-004) 109519199-109520179 retained_intron
ENSMUST00000156921 (Rpl27a-003) 109519220-109520597 nonsense_mediated_decay
ENSMUST00000174303 (Rpl27a-006) 109519270-109519938 retained_intron
ENSMUSG00000077575 (Gm24888)
predicted gene, 24888 		ENSMUST00000104387 (Gm24888-201) 109521280-109521409 snoRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049E_0001ENSG00000166441ENST00000314138ENST00000524496ENST00000525981ENST00000526562ENST00000530022ENST00000532359ENSG00000166444ENST00000313726ENST00000357665ENST00000532162ENSG00000202276ENST00000365406ENSG00000212607ENST00000391305ENSG00000254665ENST00000529883CIL_00049E_0002ENSMUSG00000031024ENSMUST00000077909ENSMUST00000079282ENSMUST00000084738ENSMUST00000168005ENSMUSG00000046364ENSMUST00000053298ENSMUST00000143107ENSMUST00000156921ENSMUSG00000077575ENSMUST00000104387
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166441 ENST00000314138 N/A N/A N/A 3.600±0.77 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524496 124.879±0.00 215.379±0.00 N/A 46.436±0.00 120.893±0.00 249.366±0.00 126.588±0.00 123.874±0.00 116.507±0.00 417.619±0.00 161.128±0.00 400.601±0.00 237.251±115.06 134.311±0.00
ENST00000525981 500.709±0.00 1042.250±0.00 N/A 121.331±0.00 516.583±0.00 592.338±0.00 N/A N/A N/A N/A N/A N/A N/A 376.057±0.00
ENST00000526562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.400±0.00 N/A N/A N/A
ENST00000529227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530022 N/A N/A 14.745±0.00 25.097±0.00 55.845±0.00 38.711±0.00 20.867±0.00 51.274±0.00 77.875±0.00 56.831±0.00 21.524±0.00 322.116±216.61 255.746±143.04 39.507±0.00
ENST00000530585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532359 313.261±0.00 523.937±0.00 57.403±0.00 95.547±39.42 198.215±53.85 337.012±210.83 121.665±83.47 230.820±115.77 228.254±44.23 500.706±428.95 200.739±161.25 749.805±724.22 850.814±441.49 177.814±118.71
ENST00000534599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166444 ENST00000313726 N/A N/A N/A N/A N/A 4.251±0.00 N/A N/A N/A N/A N/A 52.348±0.00 N/A N/A
ENST00000357665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.634±0.00
ENST00000524513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.907±0.00
ENST00000532651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202276 ENST00000365406 N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212607 ENST00000391305 N/A 1.666±0.00 58.516±0.00 34.219±33.91 183.804±183.50 103.290±0.00 59.922±59.15 75.140±74.69 161.491±161.10 31.645±28.78 151.997±0.00 45.506±44.66 1.316±0.00 0.377±0.00
ENSG00000254665 ENST00000529883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 183.853±0.00 N/A 89.744±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031024 ENSMUST00000077909 4.252±1.80 2.759±0.38 4.686±0.27 1.632±1.08 1.891±0.64 3.300±0.99 6.423±1.04 3.491±0.66 N/A 13.852±2.23 0.534±0.31 6.971±2.90 1.854±1.49 1.456±0.30
ENSMUST00000079282 N/A 2.348±0.74 1.749±0.00 1.650±0.78 N/A N/A N/A 1.201±0.00 1.505±0.70 13.790±0.00 0.732±0.36 7.257±4.19 2.397±0.88 0.568±0.00
ENSMUST00000084738 N/A N/A N/A N/A 1.606±0.00 N/A N/A 3.042±0.00 N/A N/A N/A 8.410±3.30 N/A 1.602±0.16
ENSMUST00000168005 7.536±0.01 4.956±1.42 3.273±0.29 1.620±0.18 1.993±0.41 6.712±1.18 3.522±0.61 4.300±0.85 2.591±0.90 14.872±3.98 0.511±0.00 8.711±1.67 1.652±0.47 1.881±0.00
ENSMUSG00000046364 ENSMUST00000053298 N/A N/A N/A N/A 122.745±0.00 N/A N/A N/A N/A N/A 31.857±10.35 155.915±55.52 N/A N/A
ENSMUST00000132877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143107 131.194±62.04 58.687±20.80 262.881±6.23 91.975±30.66 128.903±84.58 240.472±44.74 38.419±9.76 94.827±29.63 173.374±116.34 129.106±17.70 39.072±10.80 314.179±125.77 144.910±87.44 67.076±24.70
ENSMUST00000149143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156921 131.948±36.38 121.390±21.18 442.952±62.18 139.080±0.00 105.391±49.08 103.696±20.66 96.785±15.76 163.024±60.93 186.852±195.47 73.494±17.01 59.284±0.00 136.491±123.43 312.425±250.60 91.568±11.71
ENSMUST00000174303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077575 ENSMUST00000104387 1806.910±588.97 1762.220±0.00 70.666±43.82 22.931±7.40 1071.225±458.00 N/A 1281.137±521.83 788.546±0.00 186.547±289.30 866.927±0.00 3.028±0.00 1446.822±1753.85 19.769±11.75 N/A

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