C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: suppression of tumorigenicity 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031024 St5 10090 - 7:109523911-109617147 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077909 St5-201 109523920-109616568 protein_coding
  ENSMUST00000079282 St5-202 109523911-109617147 protein_coding
  ENSMUST00000084738 St5-203 109523920-109616568 protein_coding
  ENSMUST00000168005 St5-204 109523911-109617147 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077909ENSMUST00000079282ENSMUST00000084738ENSMUST00000168005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077909 4.252±1.80 2.759±0.38 4.686±0.27 1.632±1.08 1.891±0.64 3.300±0.99 6.423±1.04 3.491±0.66 N/A 13.852±2.23 0.534±0.31 6.971±2.90 1.854±1.49 1.456±0.30
ENSMUST00000079282 N/A 2.348±0.74 1.749±0.00 1.650±0.78 N/A N/A N/A 1.201±0.00 1.505±0.70 13.790±0.00 0.732±0.36 7.257±4.19 2.397±0.88 0.568±0.00
ENSMUST00000084738 N/A N/A N/A N/A 1.606±0.00 N/A N/A 3.042±0.00 N/A N/A N/A 8.410±3.30 N/A 1.602±0.16
ENSMUST00000168005 7.536±0.01 4.956±1.42 3.273±0.29 1.620±0.18 1.993±0.41 6.712±1.18 3.522±0.61 4.300±0.85 2.591±0.90 14.872±3.98 0.511±0.00 8.711±1.67 1.652±0.47 1.881±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q2 CIL_0008Q2_0002 VISTA 7:109258267-109860076
CIL_00049E CIL_00049E_0002 CGP 7:109519147-109617147
CIL_00049F CIL_00049F_0002 CGP 7:109523911-109712189

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0017112 ISS Rab guanyl-nucleotide exchange factor activity
GO:0032851 ISS positive regulation of Rab GTPase activity
GO:0070374 IEA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037363 st5 suppression of tumorigenicity 5 protein_coding Danio_rerio
ENSG00000166444 ST5 suppression of tumorigenicity 5 protein_coding Homo_sapiens

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