C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cilia and flagella associated protein 52
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166596 WDR16 9606 + 17:9576627-9643459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352665 WDR16-001 9576627-9643459 protein_coding
  ENST00000396219 WDR16-003 9576627-9643382 protein_coding
  ENST00000572333 WDR16-004 9576670-9600183 nonsense_mediated_decay
  ENST00000574097 WDR16-006 9635431-9643390 protein_coding
  ENST00000574937 WDR16-007 9576644-9612357 nonsense_mediated_decay
  ENST00000575247 WDR16-008 9576642-9598314 nonsense_mediated_decay
  ENST00000576320 WDR16-010 9585906-9598569 retained_intron
  ENST00000576499 WDR16-009 9576682-9594486 protein_coding
  ENST00000576630 WDR16-002 9576670-9643385 nonsense_mediated_decay
  ENST00000576714 WDR16-005 9632966-9639145 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000352665ENST00000396219ENST00000574097ENST00000574937ENST00000575247ENST00000576320ENST00000576499ENST00000576714
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000352665 N/A 0.168±0.04 0.026±0.00 N/A N/A N/A N/A 1.319±0.00 0.055±0.00 4.804±3.19
ENST00000396219 N/A 0.458±0.10 N/A 0.050±0.03 N/A 0.110±0.03 2.460±0.27 1.988±1.76 0.045±0.00 8.081±0.00
ENST00000574097 N/A 0.701±0.00 N/A N/A N/A 0.473±0.38 N/A 0.627±0.00 0.284±0.23 N/A
ENST00000574937 0.028±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000575247 0.158±0.00 N/A N/A 0.030±0.00 0.029±0.00 N/A N/A N/A N/A N/A
ENST00000576320 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.02 N/A
ENST00000576499 N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A
ENST00000576714 N/A N/A N/A 0.052±0.00 N/A 0.196±0.00 N/A 0.213±0.00 0.250±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SO CIL_0003SO_0002 CGP 17:9250471-9643459
CIL_0001LE CIL_0001LE_0002 CGP 17:9576627-9729691

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041321 wdr16 WD repeat domain 16 protein_coding Danio_rerio
ENSMUSG00000020904 Wdr16 cilia and flagella associated protein 52 protein_coding Mus_musculus

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