C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041311-ENSDARG00000041321 CGP 7955 6:18123023-18257984
GeneTranscriptPositionBiotype
ENSDARG00000041311 (stx8)
syntaxin 8 		ENSDART00000060547 (stx8-001) 18123023-18236139 protein_coding
ENSDART00000146442 (stx8-002) 18123074-18135403 nonsense_mediated_decay
ENSDARG00000041321 (wdr16)
WD repeat domain 16 		ENSDART00000060549 (wdr16-001) 18242197-18257984 protein_coding
ENSDART00000149109 (wdr16-002) 18253264-18253924 retained_intron
CIL_0003SO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170310-ENSG00000166596 CGP 9606 17:9250471-9643459
GeneTranscriptPositionBiotype
ENSG00000166596 (WDR16)
cilia and flagella associated protein 52 		ENST00000352665 (WDR16-001) 9576627-9643459 protein_coding
ENST00000396219 (WDR16-003) 9576627-9643382 protein_coding
ENST00000572333 (WDR16-004) 9576670-9600183 nonsense_mediated_decay
ENST00000574097 (WDR16-006) 9635431-9643390 protein_coding
ENST00000574937 (WDR16-007) 9576644-9612357 nonsense_mediated_decay
ENST00000575247 (WDR16-008) 9576642-9598314 nonsense_mediated_decay
ENST00000576320 (WDR16-010) 9585906-9598569 retained_intron
ENST00000576499 (WDR16-009) 9576682-9594486 protein_coding
ENST00000576630 (WDR16-002) 9576670-9643385 nonsense_mediated_decay
ENST00000576714 (WDR16-005) 9632966-9639145 processed_transcript
ENSG00000225751 (AC087501.1)
 ENST00000445617 (AC087501.1-001) 9452197-9470014 antisense
ENSG00000241654 (RPL19P18)
ribosomal protein L19 pseudogene 18 		ENST00000466869 (RPL19P18-001) 9589902-9590482 processed_pseudogene
ENSG00000262815 (RP11-565F19.4)
 ENST00000576477 (RP11-565F19.4-001) 9464742-9467422 antisense
ENSG00000263051 (RP11-565F19.3)
 ENST00000574460 (RP11-565F19.3-001) 9547298-9548541 antisense
ENSG00000263708 (RP11-85B7.4)
 ENST00000579641 (RP11-85B7.4-001) 9283174-9305651 antisense
ENSG00000271851 (RP11-565F19.2)
 ENST00000607496 (RP11-565F19.2-001) 9553323-9555696 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SO_0001ENSDARG00000041311ENSDART00000060547ENSDART00000146442ENSDARG00000041321ENSDART00000060549ENSDART00000149109CIL_0003SO_0002ENSG00000166596ENST00000352665ENST00000396219ENST00000572333ENST00000574097ENST00000574937ENST00000575247ENST00000576320ENST00000576499ENST00000576630ENST00000576714ENSG00000225751ENST00000445617ENSG00000241654ENST00000466869ENSG00000262815ENST00000576477ENSG00000263051ENST00000574460ENSG00000263708ENST00000579641ENSG00000271851ENST00000607496
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SO_0001ENSDARG00000041311ENSDART00000060547ENSDART00000146442ENSDARG00000041321ENSDART00000060549CIL_0003SO_0002ENSG00000166596ENST00000352665ENST00000396219ENST00000574097ENST00000574937ENST00000575247ENST00000576320ENST00000576499ENST00000576714ENSG00000225751ENST00000445617ENSG00000241654ENST00000466869ENSG00000262815ENST00000576477ENSG00000263051ENST00000574460ENSG00000263708ENST00000579641ENSG00000271851ENST00000607496
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041311 ENSDART00000060547 N/A N/A N/A 9.285±1.22 N/A N/A 6.030±1.96 6.866±0.97 0.432±0.00 N/A 4.189±0.00 N/A N/A N/A
ENSDART00000146442 N/A N/A N/A 8.250±1.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000041321 ENSDART00000060549 N/A N/A N/A 0.667±0.07 N/A N/A 0.022±0.00 2.503±0.33 N/A N/A 0.034±0.00 N/A N/A N/A
ENSDART00000149109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166596 ENST00000352665 N/A N/A N/A 0.168±0.04 0.026±0.00 N/A N/A N/A N/A N/A N/A 1.319±0.00 0.055±0.00 4.804±3.19
ENST00000396219 N/A N/A N/A 0.458±0.10 N/A 0.050±0.03 N/A 0.110±0.03 N/A 2.460±0.27 N/A 1.988±1.76 0.045±0.00 8.081±0.00
ENST00000572333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574097 N/A N/A N/A 0.701±0.00 N/A N/A N/A 0.473±0.38 N/A N/A N/A 0.627±0.00 0.284±0.23 N/A
ENST00000574937 N/A 0.028±0.00 N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575247 N/A 0.158±0.00 N/A N/A N/A 0.030±0.00 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000576320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.02 N/A
ENST00000576499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A
ENST00000576630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576714 N/A N/A N/A N/A N/A 0.052±0.00 N/A 0.196±0.00 N/A N/A N/A 0.213±0.00 0.250±0.00 N/A
ENSG00000225751 ENST00000445617 N/A N/A N/A N/A 0.154±0.00 N/A 0.017±0.00 0.135±0.00 0.033±0.00 N/A N/A N/A 0.031±0.00 0.034±0.00
ENSG00000241654 ENST00000466869 N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A 0.044±0.00 N/A 0.166±0.00
ENSG00000262815 ENST00000576477 0.394±0.00 2.027±0.00 N/A 0.794±0.00 1.132±0.00 0.510±0.23 0.627±0.00 1.759±0.00 0.259±0.05 0.686±0.00 0.869±0.00 0.517±0.12 0.120±0.01 0.869±0.20
ENSG00000263051 ENST00000574460 N/A N/A N/A N/A N/A N/A N/A 0.306±0.00 N/A N/A N/A N/A N/A 0.198±0.00
ENSG00000263708 ENST00000579641 N/A 0.038±0.00 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00
ENSG00000271851 ENST00000607496 0.458±0.00 0.961±0.00 0.213±0.00 0.316±0.04 0.273±0.05 0.205±0.10 0.184±0.09 0.358±0.23 0.399±0.10 0.209±0.00 0.043±0.00 0.350±0.06 0.493±0.29 0.568±0.15

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