C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166707 ZCCHC18 9606 + X:104112131-104115846 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000422784 ZCCHC18-001 104112544-104115842 processed_transcript
  ENST00000423478 ZCCHC18-002 104112131-104112872 processed_transcript
  ENST00000537356 ZCCHC18-006 104112511-104115604 protein_coding
  ENST00000603049 ZCCHC18-004 104112889-104113580 processed_transcript
  ENST00000605784 ZCCHC18-005 104112887-104113640 processed_transcript
  ENST00000611638 ZCCHC18-201 104112526-104115846 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000422784ENST00000537356ENST00000603049ENST00000605784ENST00000611638
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000422784 0.057±0.00 0.461±0.00 0.893±0.46 0.248±0.11 0.222±0.13 N/A 0.018±0.00 0.491±0.00 0.417±0.00 0.995±0.95 N/A 0.425±0.09
ENST00000537356 0.021±0.00 0.719±0.00 N/A N/A N/A 0.059±0.00 0.035±0.00 0.011±0.00 0.195±0.00 0.081±0.05 0.119±0.00 0.354±0.18
ENST00000603049 N/A N/A N/A N/A 0.371±0.00 N/A N/A N/A 0.511±0.00 0.711±0.00 0.196±0.08 N/A
ENST00000605784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A
ENST00000611638 N/A N/A 0.407±0.00 0.045±0.00 0.103±0.00 0.071±0.00 N/A N/A N/A 0.470±0.07 0.037±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000721 CIL_000721_0001 CGP X:104063871-104157027
CIL_00012D CIL_00012D_0001 CGP X:104099214-104157027
CIL_000531 CIL_000531_0001 CGP X:104112131-104195902

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031428 Zcchc18 zinc finger, CCHC domain containing 18 protein_coding Mus_musculus
ENSMUSG00000036699 Zcchc12 zinc finger, CCHC domain containing 12 protein_coding Mus_musculus

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