C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036699 Zcchc12 10090 + X:36195904-36199158 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048067 Zcchc12-001 36195946-36199158 protein_coding
  ENSMUST00000115256 Zcchc12-004 36195986-36199157 protein_coding
  ENSMUST00000115257 Zcchc12-003 36195959-36199157 protein_coding
  ENSMUST00000115258 Zcchc12-002 36195904-36199150 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048067ENSMUST00000115256ENSMUST00000115257ENSMUST00000115258
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048067 0.096±0.00 0.363±0.08 0.171±0.00 26.476±7.43 N/A 0.488±0.15 0.078±0.02 0.056±0.00 0.153±0.09 N/A 0.004±0.00 0.533±0.25 0.119±0.04 N/A
ENSMUST00000115256 N/A N/A N/A 10.656±4.55 N/A N/A N/A N/A N/A N/A N/A 0.424±0.23 N/A 0.767±0.11
ENSMUST00000115257 0.028±0.01 0.471±0.00 N/A N/A 0.057±0.01 0.710±0.00 0.049±0.00 0.117±0.02 0.053±0.05 0.077±0.04 0.019±0.00 0.389±0.21 0.040±0.03 N/A
ENSMUST00000115258 N/A 0.553±0.11 N/A 4.847±0.00 N/A 0.658±0.15 N/A N/A 0.040±0.00 N/A N/A 0.449±0.16 N/A 0.240±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000715 CIL_000715_0002 CGP X:36112110-36199158
CIL_00071C CIL_00071C_0002 CGP X:36195904-36362341

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016607 IDA nuclear speck
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030509 IDA BMP signaling pathway
GO:0032183 IDA SUMO binding
GO:2000327 IDA positive regulation of ligand-dependent nuclear receptor transcription coactivator activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166707 ZCCHC18 zinc finger, CCHC domain containing 18 protein_coding Homo_sapiens
ENSG00000174460 ZCCHC12 zinc finger, CCHC domain containing 12 protein_coding Homo_sapiens

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