C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031428 Zcchc18 10090 + X:136993155-136998472 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033804 Zcchc18-003 136993298-136998472 protein_coding
  ENSMUST00000101227 Zcchc18-002 136993159-136996116 protein_coding
  ENSMUST00000113067 Zcchc18-001 136993155-136996378 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033804ENSMUST00000101227ENSMUST00000113067
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033804 0.034±0.03 N/A N/A 4.964±0.51 0.050±0.03 0.062±0.00 0.007±0.00 0.021±0.01 0.020±0.00 0.041±0.00 0.022±0.01 0.191±0.08 0.033±0.01 0.083±0.01
ENSMUST00000101227 0.309±0.20 2.030±0.92 N/A 45.534±38.74 0.471±0.17 0.688±0.40 0.152±0.05 0.216±0.12 0.070±0.04 0.148±0.07 0.030±0.02 0.895±0.64 0.063±0.03 0.538±0.14
ENSMUST00000113067 0.192±0.02 0.888±0.27 0.918±0.03 30.472±9.48 0.167±0.01 0.578±0.17 0.109±0.00 0.221±0.05 0.031±0.01 0.083±0.03 0.085±0.04 1.444±0.77 0.089±0.03 0.541±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000721 CIL_000721_0002 CGP X:136974022-137038302
CIL_00012D CIL_00012D_0002 CGP X:136981116-137038302
CIL_000531 CIL_000531_0002 CGP X:136993155-137082503

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0016607 IBA nuclear speck
GO:0030374 IBA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030509 IBA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166707 ZCCHC18 zinc finger, CCHC domain containing 18 protein_coding Homo_sapiens
ENSG00000174460 ZCCHC12 zinc finger, CCHC domain containing 12 protein_coding Homo_sapiens

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