C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: methyl-CpG binding domain protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166987 MBD6 9606 + 12:57520710-57530148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355673 MBD6-001 57522744-57530148 protein_coding
  ENST00000546632 MBD6-009 57522840-57524766 protein_coding
  ENST00000546805 MBD6-008 57521680-57524956 protein_coding
  ENST00000547545 MBD6-004 57526643-57530143 nonsense_mediated_decay
  ENST00000547844 MBD6-016 57529002-57530146 nonsense_mediated_decay
  ENST00000548550 MBD6-014 57527502-57528190 retained_intron
  ENST00000548887 MBD6-005 57520710-57525414 protein_coding
  ENST00000549042 MBD6-012 57524029-57525091 nonsense_mediated_decay
  ENST00000549231 MBD6-007 57521048-57524764 processed_transcript
  ENST00000549623 MBD6-010 57522842-57525455 protein_coding
  ENST00000551351 MBD6-006 57520965-57524765 protein_coding
  ENST00000552163 MBD6-015 57527912-57528712 protein_coding
  ENST00000552255 MBD6-011 57523063-57524742 protein_coding
  ENST00000552659 MBD6-013 57524319-57526653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000355673
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000355673 12.932±0.00 14.486±0.00 0.722±0.00 4.814±3.56 9.654±8.07 7.725±6.51 9.540±0.00 19.835±0.00 13.230±8.57 14.062±0.09 18.676±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IEA:IDA nucleus
GO:0010369 IDA chromocenter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086980 mbd6 methyl-CpG binding domain protein 6 protein_coding Danio_rerio
ENSMUSG00000025409 Mbd6 methyl-CpG binding domain protein 6 protein_coding Mus_musculus

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