C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyl-CpG binding domain protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355673 MBD6-001 ENSG00000166987 9606 + 12:57522744-57530148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000355673
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000355673 12.932±0.00 14.486±0.00 0.722±0.00 4.814±3.56 9.654±8.07 7.725±6.51 9.540±0.00 19.835±0.00 13.230±8.57 14.062±0.09 18.676±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IEA:IDA nucleus
GO:0010369 IDA chromocenter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119078 Mbd6-002 protein_coding Mus_musculus 0 5788
ENSMUST00000026476 Mbd6-001 protein_coding Mus_musculus 0 5648
ENSMUST00000126243 Mbd6-007 nonsense_mediated_decay Mus_musculus 0 2562
ENSMUST00000172567 Mbd6-008 protein_coding Mus_musculus 0 911
ENSMUST00000136169 Mbd6-005 nonsense_mediated_decay Mus_musculus 0 662
ENSMUST00000156208 Mbd6-003 protein_coding Mus_musculus 0 595
ENSMUST00000154851 Mbd6-004 protein_coding Mus_musculus 0 538

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