C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167107 ACSF2 9606 + 17:50426158-50474845 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300441 ACSF2-001 50426158-50474835 protein_coding
  ENST00000427954 ACSF2-002 50426219-50474837 protein_coding
  ENST00000502667 ACSF2-005 50426252-50474831 protein_coding
  ENST00000503295 ACSF2-024 50472131-50473760 retained_intron
  ENST00000503387 ACSF2-018 50469906-50471523 retained_intron
  ENST00000503408 ACSF2-008 50426218-50461265 nonsense_mediated_decay
  ENST00000504392 ACSF2-004 50426218-50474670 protein_coding
  ENST00000504945 ACSF2-009 50426218-50461048 retained_intron
  ENST00000506052 ACSF2-023 50462239-50463041 retained_intron
  ENST00000506085 ACSF2-007 50468343-50474845 processed_transcript
  ENST00000506582 ACSF2-010 50426218-50462426 protein_coding
  ENST00000507769 ACSF2-014 50464281-50471400 retained_intron
  ENST00000507792 ACSF2-022 50473825-50474774 retained_intron
  ENST00000508245 ACSF2-012 50463480-50473932 nonsense_mediated_decay
  ENST00000508734 ACSF2-017 50468359-50471065 processed_transcript
  ENST00000509806 ACSF2-015 50464544-50473403 processed_transcript
  ENST00000510262 ACSF2-013 50463516-50472446 nonsense_mediated_decay
  ENST00000510410 ACSF2-003 50426158-50474670 nonsense_mediated_decay
  ENST00000511147 ACSF2-021 50472461-50474256 processed_transcript
  ENST00000511288 ACSF2-006 50468329-50471761 retained_intron
  ENST00000512119 ACSF2-019 50470063-50473963 processed_transcript
  ENST00000512537 ACSF2-020 50470931-50473790 retained_intron
  ENST00000513101 ACSF2-011 50462536-50471188 retained_intron
  ENST00000513544 ACSF2-016 50467840-50473901 processed_transcript
  ENST00000570356 ACSF2-025 50460663-50461411 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300441ENST00000427954ENST00000502667ENST00000503387ENST00000504392ENST00000506085ENST00000508245ENST00000510410ENST00000511147ENST00000512537ENST00000513101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300441 4.458±0.00 4.892±0.00 N/A 2.154±0.00 7.705±7.18 6.893±0.00 1.938±1.38 7.153±5.18 3.373±0.00 3.232±0.00 1.763±0.00 8.482±6.69 11.888±2.86 1.811±0.19
ENST00000427954 N/A N/A N/A 0.439±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502667 2.518±0.00 N/A 7.493±0.00 0.962±0.79 0.331±0.00 4.477±0.00 1.136±0.00 17.542±0.00 N/A 6.937±0.00 2.531±1.71 1.106±0.00 N/A 4.118±0.00
ENST00000503387 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.147±0.00 N/A N/A N/A N/A
ENST00000504392 N/A N/A N/A N/A N/A N/A N/A N/A 1.893±0.00 1.328±0.00 N/A N/A N/A N/A
ENST00000506085 4.301±0.00 N/A N/A N/A N/A N/A 0.360±0.00 N/A N/A N/A 3.315±0.00 20.577±0.00 N/A 4.304±0.00
ENST00000508245 N/A N/A N/A N/A 1.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.722±0.00
ENST00000510410 N/A N/A N/A N/A N/A N/A N/A N/A 2.174±0.00 N/A 1.069±0.00 6.517±0.00 10.608±0.00 0.893±0.00
ENST00000511147 15.609±0.00 11.464±0.00 N/A N/A 45.090±0.00 17.596±0.00 N/A 57.055±0.00 N/A N/A N/A N/A N/A 3.204±0.00
ENST00000512537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.730±0.00 23.508±0.00 3.686±0.00
ENST00000513101 N/A N/A N/A 1.466±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219
CIL_0004X5 CIL_0004X5_0002 CGP 17:50426158-50474845

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0006631 IEA fatty acid metabolic process
GO:0008152 IEA metabolic process
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061201 acsf2 acyl-CoA synthetase family member 2 protein_coding Danio_rerio
ENSMUSG00000076435 Acsf2 acyl-CoA synthetase family member 2 protein_coding Mus_musculus

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