C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167291 TBC1D16 9606 - 17:79932343-80035848 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310924 TBC1D16-001 79932343-80035848 protein_coding
  ENST00000340848 TBC1D16-003 79937908-79950836 protein_coding
  ENST00000570373 TBC1D16-008 79944045-79950834 protein_coding
  ENST00000571872 TBC1D16-005 79950571-79993634 protein_coding
  ENST00000572862 TBC1D16-004 79943856-79950828 protein_coding
  ENST00000573782 TBC1D16-006 79947648-79950830 protein_coding
  ENST00000574241 TBC1D16-009 79947645-79952013 protein_coding
  ENST00000574427 TBC1D16-007 79947695-79950833 protein_coding
  ENST00000576768 TBC1D16-002 79935792-79950857 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310924ENST00000340848ENST00000574427ENST00000576768
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310924 5.033±0.00 3.092±0.00 1.008±0.00 0.650±0.29 6.399±5.13 1.440±0.76 1.503±0.00 3.815±0.00 2.130±1.52 1.361±0.00 0.403±0.00 3.017±2.26 0.767±0.45 1.082±0.75
ENST00000340848 N/A N/A 1.115±0.00 1.254±0.00 1.234±0.00 N/A 0.273±0.00 0.223±0.00 0.581±0.00 0.619±0.00 N/A 1.651±0.00 0.771±0.00 N/A
ENST00000574427 N/A N/A N/A N/A N/A N/A N/A N/A 2.838±0.00 N/A N/A N/A N/A N/A
ENST00000576768 10.234±0.00 3.583±0.00 0.948±0.00 1.304±0.64 14.597±0.00 3.599±0.00 1.056±0.87 4.624±0.00 2.097±1.22 1.243±0.92 0.634±0.26 3.025±1.56 1.650±1.18 1.488±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AW CIL_0005AW_0001 CGP 17:79833156-80035848
CIL_000040 CIL_000040_0001 CGP 17:79932343-80100613

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036994 tbc1d16 TBC1 domain family, member 16 protein_coding Danio_rerio
ENSMUSG00000039976 Tbc1d16 TBC1 domain family, member 16 protein_coding Mus_musculus

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