| Transcript ID | Brain |
|---|---|
| ENST00000360796 | 64.379±7.19 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | Berardinelli-Seip congenital lipodystrophy 2 (seipin) | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000168000  |
BSCL2 | 9606 | - |
11:62690275-62709845  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000278893 |
BSCL2-008 | 62690276-62706315 | protein_coding | ||
| ENST00000301781 |
BSCL2-002 | 62690312-62707518 | nonsense_mediated_decay | ||
| ENST00000360796 |
BSCL2-003 | 62690276-62707398 | protein_coding | ||
| ENST00000403098 |
BSCL2-027 | 62690281-62692749 | protein_coding | ||
| ENST00000403550 |
BSCL2-006 | 62690295-62706234 | protein_coding | ||
| ENST00000405837 |
BSCL2-001 | 62690275-62709514 | protein_coding | ||
| ENST00000407022 |
BSCL2-005 | 62690295-62706344 | protein_coding | ||
| ENST00000412351 |
BSCL2-015 | 62691392-62697566 | processed_transcript | ||
| ENST00000413908 |
BSCL2-010 | 62705494-62707463 | nonsense_mediated_decay | ||
| ENST00000421906 |
BSCL2-004 | 62690315-62706344 | protein_coding | ||
| ENST00000448568 |
BSCL2-022 | 62692376-62706218 | protein_coding | ||
| ENST00000449636 |
BSCL2-012 | 62690275-62691339 | protein_coding | ||
| ENST00000463679 |
BSCL2-011 | 62690278-62691342 | retained_intron | ||
| ENST00000464544 |
BSCL2-009 | 62705426-62709845 | protein_coding | ||
| ENST00000468505 |
BSCL2-013 | 62690970-62692797 | retained_intron | ||
| ENST00000470529 |
BSCL2-014 | 62690276-62691178 | retained_intron | ||
| ENST00000524862 |
BSCL2-020 | 62692749-62709320 | protein_coding | ||
| ENST00000525000 |
BSCL2-025 | 62694676-62707144 | protein_coding | ||
| ENST00000526426 |
BSCL2-028 | 62692410-62694712 | processed_transcript | ||
| ENST00000528874 |
BSCL2-021 | 62707126-62709064 | protein_coding | ||
| ENST00000530009 |
BSCL2-018 | 62707111-62709845 | protein_coding | ||
| ENST00000530900 |
BSCL2-026 | 62694600-62706256 | processed_transcript | ||
| ENST00000531524 |
BSCL2-023 | 62692696-62709528 | protein_coding | ||
| ENST00000532115 |
BSCL2-017 | 62691336-62694711 | processed_transcript | ||
| ENST00000532818 |
BSCL2-019 | 62705336-62709731 | protein_coding | ||
| ENST00000533982 |
BSCL2-024 | 62694708-62707349 | protein_coding | ||
| ENST00000537604 |
BSCL2-029 | 62694558-62706220 | processed_transcript | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089X | CIL_00089X_0001 | VISTA | 11:62298635-62900076 |
| CIL_000689 | CIL_000689_0002 | CGP | 11:62690275-62709845 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0008219 | IEA | cell death |
| GO:0016042 | IEA | lipid catabolic process |
| GO:0019915 | IMP | lipid storage |
| GO:0030176 | IDA | integral component of endoplasmic reticulum membrane |
| GO:0034389 | IMP | lipid particle organization |
| GO:0045444 | ISS | fat cell differentiation |
| GO:0050995 | ISS | negative regulation of lipid catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000025912
|
bscl2l | Bernardinelli-Seip congenital lipodystrophy 2, like | protein_coding | Danio_rerio | |
|
ENSDARG00000037008
|
bscl2 | Bernardinelli-Seip congenital lipodystrophy 2 (seipin) | protein_coding | Danio_rerio | |
|
ENSMUSG00000071657
|
Bscl2 | Berardinelli-Seip congenital lipodystrophy 2 homolog (seipin) | protein_coding | Mus_musculus | |
