C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: scavenger receptor class A, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168079 SCARA5 9606 - 8:27869882-27992727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354914 SCARA5-001 27869882-27992727 protein_coding
  ENST00000380385 SCARA5-003 27870236-27992664 protein_coding
  ENST00000518030 SCARA5-005 27904728-27987615 protein_coding
  ENST00000524352 SCARA5-004 27904369-27992624 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354914ENST00000380385ENST00000518030ENST00000524352
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354914 15.117±0.00 3.947±0.00 0.324±0.07 14.321±9.99 26.297±21.70 4.559±2.56 0.802±0.13 8.757±8.64 9.696±7.60 5.733±0.00 2.743±2.19 9.172±4.47 11.132±8.72
ENST00000380385 7.369±0.00 2.083±0.00 0.127±0.00 2.894±1.35 15.767±11.21 1.554±0.49 0.726±0.16 4.442±4.39 2.072±0.00 3.155±0.00 1.286±0.00 10.253±4.98 7.688±5.14
ENST00000518030 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.782±0.00 N/A N/A N/A
ENST00000524352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.553±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DK CIL_0009DK_0001 VISTA 8:27594923-28195834

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0005515 IEA protein binding
GO:0005887 ISS integral component of plasma membrane
GO:0006879 ISS cellular iron ion homeostasis
GO:0006897 ISS endocytosis
GO:0006898 IEA receptor-mediated endocytosis
GO:0009986 IEA cell surface
GO:0010468 IMP regulation of gene expression
GO:0016020 IEA membrane
GO:0030193 IMP regulation of blood coagulation
GO:0034605 IEA cellular response to heat
GO:0034755 ISS iron ion transmembrane transport
GO:0070207 ISS protein homotrimerization
GO:0070287 ISS ferritin receptor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010425 scara5 scavenger receptor class A, member 5 (putative) protein_coding Danio_rerio
ENSMUSG00000022032 Scara5 scavenger receptor class A, member 5 (putative) protein_coding Mus_musculus

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