C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hook microtubule-tethering protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168172 HOOK3 9606 + 8:42896932-43030539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307602 HOOK3-001 42896932-43030539 protein_coding
  ENST00000524839 HOOK3-004 43000819-43013121 processed_transcript
  ENST00000526882 HOOK3-003 42974117-43010348 nonsense_mediated_decay
  ENST00000527306 HOOK3-002 42896946-42998156 retained_intron
  ENST00000533338 HOOK3-006 43018405-43028112 protein_coding
  ENST00000533539 HOOK3-005 42997590-43018392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307602ENST00000527306
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307602 8.648±0.00 3.206±0.00 1.217±0.00 4.701±0.34 3.254±0.86 2.052±0.77 1.917±0.02 3.611±2.47 5.040±0.46 1.900±0.33 3.951±1.57 1.822±0.51 2.904±0.71
ENST00000527306 N/A N/A 7.331±0.00 N/A N/A N/A N/A N/A 9.607±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LW CIL_0005LW_0002 CGP 8:42849637-43030539

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000242 ISS pericentriolar material
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005801 IDA cis-Golgi network
GO:0005813 ISS centrosome
GO:0005815 IDA microtubule organizing center
GO:0005874 IEA microtubule
GO:0007032 IMP endosome organization
GO:0007040 IMP lysosome organization
GO:0008017 IDA microtubule binding
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0022027 ISS interkinetic nuclear migration
GO:0030897 IDA HOPS complex
GO:0031122 IMP cytoplasmic microtubule organization
GO:0034451 IEA centriolar satellite
GO:0034454 ISS microtubule anchoring at centrosome
GO:0042802 IPI identical protein binding
GO:0045022 IMP early endosome to late endosome transport
GO:0050768 ISS negative regulation of neurogenesis
GO:0051645 IMP Golgi localization
GO:0070695 IDA FHF complex
GO:0071539 ISS protein localization to centrosome
GO:0097150 IEA neuronal stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012990 HOOK3 hook microtubule-tethering protein 3 protein_coding Danio_rerio
ENSMUSG00000037234 Hook3 hook homolog 3 (Drosophila) protein_coding Mus_musculus

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