C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hook microtubule-tethering protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307602 HOOK3-001 ENSG00000168172 9606 + 8:42896932-43030539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307602
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307602 8.648±0.00 3.206±0.00 1.217±0.00 4.701±0.34 3.254±0.86 2.052±0.77 1.917±0.02 3.611±2.47 5.040±0.46 1.900±0.33 3.951±1.57 1.822±0.51 2.904±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LW CIL_0005LW_0002 CGP 8:42849637-43030539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000242 ISS pericentriolar material
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005801 IDA cis-Golgi network
GO:0005813 ISS centrosome
GO:0005815 IDA microtubule organizing center
GO:0005874 IEA microtubule
GO:0007032 IMP endosome organization
GO:0007040 IMP lysosome organization
GO:0008017 IDA microtubule binding
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0022027 ISS interkinetic nuclear migration
GO:0030897 IDA HOPS complex
GO:0031122 IMP cytoplasmic microtubule organization
GO:0034451 IEA centriolar satellite
GO:0034454 ISS microtubule anchoring at centrosome
GO:0042802 IPI identical protein binding
GO:0045022 IMP early endosome to late endosome transport
GO:0050768 ISS negative regulation of neurogenesis
GO:0051645 IMP Golgi localization
GO:0070695 IDA FHF complex
GO:0071539 ISS protein localization to centrosome
GO:0097150 IEA neuronal stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037182 Hook3-001 protein_coding Mus_musculus 0 3278
ENSMUST00000147613 Hook3-002 protein_coding Mus_musculus 0 743
ENSMUST00000152144 Hook3-003 retained_intron Mus_musculus 0 231
ENSMUST00000121101 Rspry1-002 protein_coding Mus_musculus 0.0003 55

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