C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin, light chain 1, alkali; skeletal, fast
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168530 MYL1 9606 - 2:210290150-210315190 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341685 MYL1-002 210290150-210303629 protein_coding
  ENST00000352451 MYL1-001 210290150-210315190 protein_coding
  ENST00000484290 MYL1-004 210293723-210303615 processed_transcript
  ENST00000496436 MYL1-003 210291032-210303615 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000341685ENST00000352451ENST00000484290ENST00000496436
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000341685 0.016±0.00 0.055±0.00 0.047±0.00 61.578±59.86 0.121±0.08 0.200±0.00 N/A 1.988±0.00 605.475±358.85 0.030±0.00 10.009±9.98
ENST00000352451 N/A N/A 0.045±0.00 16.008±15.86 N/A N/A 0.076±0.00 2.807±0.00 803.170±0.00 0.161±0.01 1.915±0.00
ENST00000484290 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A
ENST00000496436 N/A N/A 0.257±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AJ CIL_0000AJ_0002 CGP 2:210290150-210477652

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005829 TAS cytosol
GO:0005859 NAS muscle myosin complex
GO:0006936 IDA muscle contraction
GO:0008307 NAS structural constituent of muscle
GO:0030016 IDA myofibril
GO:0030017 NAS sarcomere
GO:0030049 NAS muscle filament sliding
GO:0043292 IEA contractile fiber
GO:0060048 IEA cardiac muscle contraction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014196 myl1 myosin, light chain 1, alkali; skeletal, fast protein_coding Danio_rerio
ENSDARG00000017441 mylz3 myosin, light polypeptide 3, skeletal muscle protein_coding Danio_rerio
ENSMUSG00000061816 Myl1 myosin, light polypeptide 1 protein_coding Mus_musculus

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