C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and BTB domain containing 49
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168826 ZBTB49 9606 + 4:4290251-4321786 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337872 ZBTB49-001 4290251-4321786 protein_coding
  ENST00000502918 ZBTB49-004 4290269-4302274 protein_coding
  ENST00000503703 ZBTB49-002 4290251-4321786 nonsense_mediated_decay
  ENST00000504302 ZBTB49-005 4302627-4320697 protein_coding
  ENST00000511458 ZBTB49-003 4302732-4320697 nonsense_mediated_decay
  ENST00000515012 ZBTB49-006 4290251-4321398 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337872ENST00000502918ENST00000503703ENST00000504302ENST00000511458ENST00000515012
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337872 0.145±0.00 N/A N/A N/A 0.241±0.00 N/A N/A 0.151±0.00 0.572±0.00 N/A N/A 0.515±0.40 0.184±0.00 0.979±0.00
ENST00000502918 N/A N/A N/A N/A N/A 1.150±0.00 N/A N/A 1.043±0.00 N/A N/A N/A N/A N/A
ENST00000503703 N/A 0.441±0.00 N/A N/A 0.093±0.04 0.319±0.00 0.202±0.00 0.126±0.00 N/A N/A 0.026±0.00 0.747±0.53 0.450±0.30 0.860±0.19
ENST00000504302 N/A N/A N/A N/A 0.390±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511458 N/A N/A 0.278±0.00 N/A N/A N/A 0.400±0.00 N/A N/A N/A 0.420±0.00 1.242±0.00 1.181±0.00 4.594±0.00
ENST00000515012 0.155±0.00 0.344±0.00 0.275±0.00 0.286±0.00 N/A 0.704±0.29 0.397±0.00 0.682±0.00 0.113±0.00 0.083±0.00 0.107±0.00 0.490±0.07 0.352±0.00 1.202±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZA CIL_0008ZA_0001 VISTA 4:4157066-4757929
CIL_00096M CIL_00096M_0001 VISTA 4:4215001-4816750
CIL_0008QQ CIL_0008QQ_0001 VISTA 4:4221140-4822323
CIL_0003E6 CIL_0003E6_0002 CGP 4:4267701-4321786

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089169 ZBTB49 zinc finger and BTB domain containing 49 protein_coding Danio_rerio
ENSMUSG00000029127 Zbtb49 zinc finger and BTB domain containing 49 protein_coding Mus_musculus

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