C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and BTB domain containing 49
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337872 ZBTB49-001 ENSG00000168826 9606 + 4:4290251-4321786 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverOvaryPlacentaTestisENST00000337872
Transcript ID Adipose Breast Kidney Liver Ovary Placenta Testis
ENST00000337872 0.145±0.00 0.241±0.00 0.151±0.00 0.572±0.00 0.515±0.40 0.184±0.00 0.979±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZA CIL_0008ZA_0001 VISTA 4:4157066-4757929
CIL_00096M CIL_00096M_0001 VISTA 4:4215001-4816750
CIL_0008QQ CIL_0008QQ_0001 VISTA 4:4221140-4822323
CIL_0003E6 CIL_0003E6_0002 CGP 4:4267701-4321786

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094833 Zbtb49-001 protein_coding Mus_musculus 0 1031
ENSMUST00000114113 Zbtb49-007 protein_coding Mus_musculus 0 424
ENSMUST00000136475 Zbtb49-004 nonsense_mediated_decay Mus_musculus 0 424
ENSMUST00000126267 Zbtb49-002 nonsense_mediated_decay Mus_musculus 0 424
ENSMUST00000129161 Zbtb49-010 processed_transcript Mus_musculus 0 252
ENSMUST00000123106 Zbtb49-009 processed_transcript Mus_musculus 0 200

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