C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and BTB domain containing 49
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029127 Zbtb49 10090 - 5:38189735-38220457 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094833 Zbtb49-001 38200079-38220457 protein_coding
  ENSMUST00000114113 Zbtb49-007 38212037-38220454 protein_coding
  ENSMUST00000123106 Zbtb49-009 38203805-38220431 processed_transcript
  ENSMUST00000124939 Zbtb49-005 38189735-38206183 processed_transcript
  ENSMUST00000126267 Zbtb49-002 38200246-38220413 nonsense_mediated_decay
  ENSMUST00000129161 Zbtb49-010 38203749-38213552 processed_transcript
  ENSMUST00000136475 Zbtb49-004 38200634-38220425 nonsense_mediated_decay
  ENSMUST00000137577 Zbtb49-008 38215970-38220424 retained_intron
  ENSMUST00000138820 Zbtb49-006 38200634-38220427 nonsense_mediated_decay
  ENSMUST00000143436 Zbtb49-003 38200249-38220364 nonsense_mediated_decay
  ENSMUST00000146859 Zbtb49-011 38203248-38203797 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094833ENSMUST00000114113ENSMUST00000124939ENSMUST00000126267ENSMUST00000136475ENSMUST00000138820ENSMUST00000143436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094833 0.818±0.26 1.711±0.19 1.285±0.62 N/A 1.268±0.28 0.982±0.27 0.260±0.00 0.474±0.13 0.563±0.20 1.201±0.00 0.209±0.04 2.932±1.23 1.080±0.41 2.594±0.90
ENSMUST00000114113 N/A N/A N/A 0.712±0.00 0.224±0.00 1.195±0.00 0.293±0.08 N/A 0.273±0.08 1.161±0.01 0.081±0.02 1.502±0.41 0.543±0.14 N/A
ENSMUST00000124939 N/A 1.013±0.00 N/A N/A 0.181±0.00 N/A N/A 0.537±0.06 0.293±0.08 N/A 0.144±0.02 N/A N/A 1.427±0.18
ENSMUST00000126267 0.417±0.00 N/A 0.925±0.00 1.776±0.38 0.915±0.23 1.994±1.10 0.227±0.03 0.545±0.04 0.629±0.43 1.244±0.20 0.312±0.15 2.247±0.79 0.584±0.20 2.340±0.03
ENSMUST00000136475 1.395±0.37 2.600±0.60 N/A N/A 2.558±0.84 2.424±0.32 0.642±0.06 1.053±0.40 0.662±0.33 2.550±0.48 0.294±0.08 2.742±0.70 0.988±0.50 2.143±0.39
ENSMUST00000138820 N/A 2.056±0.54 N/A N/A 1.135±0.00 N/A N/A N/A 0.474±0.19 N/A 0.293±0.00 N/A N/A N/A
ENSMUST00000143436 N/A N/A N/A 3.350±1.42 N/A N/A N/A N/A 0.710±0.25 N/A 0.434±0.08 2.087±0.00 1.758±0.69 3.185±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000969 CIL_000969_0002 VISTA 5:37601106-38202493
CIL_00096C CIL_00096C_0002 VISTA 5:37617742-38218594
CIL_00096B CIL_00096B_0002 VISTA 5:37667623-38269196
CIL_0008QQ CIL_0008QQ_0002 VISTA 5:37760247-38361421
CIL_00096M CIL_00096M_0002 VISTA 5:37765055-38366694
CIL_0008ZA CIL_0008ZA_0002 VISTA 5:37806142-38406996

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089169 ZBTB49 zinc finger and BTB domain containing 49 protein_coding Danio_rerio
ENSG00000168826 ZBTB49 zinc finger and BTB domain containing 49 protein_coding Homo_sapiens

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