C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein H1 (H)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169045 HNRNPH1 9606 - 5:179614178-179634784 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329433 HNRNPH1-009 179614181-179623168 protein_coding
  ENST00000356731 HNRNPH1-001 179614179-179624669 protein_coding
  ENST00000393432 HNRNPH1-006 179614178-179623710 protein_coding
  ENST00000442819 HNRNPH1-005 179614179-179623721 protein_coding
  ENST00000502632 HNRNPH1-012 179614890-179618453 retained_intron
  ENST00000502904 HNRNPH1-011 179614179-179618899 retained_intron
  ENST00000503105 HNRNPH1-028 179617817-179623671 protein_coding
  ENST00000503664 HNRNPH1-014 179621347-179624600 protein_coding
  ENST00000504348 HNRNPH1-021 179619301-179623671 protein_coding
  ENST00000504549 HNRNPH1-029 179616158-179618515 retained_intron
  ENST00000504779 HNRNPH1-025 179618045-179623670 nonsense_mediated_decay
  ENST00000505087 HNRNPH1-018 179621011-179623712 retained_intron
  ENST00000505811 HNRNPH1-015 179618224-179624584 protein_coding
  ENST00000506721 HNRNPH1-022 179618208-179623670 protein_coding
  ENST00000508103 HNRNPH1-027 179618205-179623698 protein_coding
  ENST00000510411 HNRNPH1-008 179614181-179623169 protein_coding
  ENST00000510431 HNRNPH1-026 179618236-179623698 protein_coding
  ENST00000510678 HNRNPH1-007 179614181-179623169 nonsense_mediated_decay
  ENST00000512273 HNRNPH1-017 179621254-179624411 nonsense_mediated_decay
  ENST00000513225 HNRNPH1-013 179619315-179624600 protein_coding
  ENST00000513230 HNRNPH1-023 179622952-179623670 retained_intron
  ENST00000513972 HNRNPH1-019 179620675-179623710 retained_intron
  ENST00000514332 HNRNPH1-003 179614180-179623671 retained_intron
  ENST00000514731 HNRNPH1-002 179616764-179623669 retained_intron
  ENST00000515158 HNRNPH1-020 179620897-179623707 protein_coding
  ENST00000515446 HNRNPH1-024 179622849-179623646 retained_intron
  ENST00000515481 HNRNPH1-010 179614180-179620032 retained_intron
  ENST00000515714 HNRNPH1-016 179621242-179624584 protein_coding
  ENST00000518548 HNRNPH1-039 179618161-179621461 processed_transcript
  ENST00000518602 HNRNPH1-042 179633892-179634473 processed_transcript
  ENST00000519033 HNRNPH1-034 179614686-179618043 protein_coding
  ENST00000519056 HNRNPH1-045 179618239-179623669 protein_coding
  ENST00000519455 HNRNPH1-044 179620814-179623668 processed_transcript
  ENST00000519707 HNRNPH1-047 179620773-179623670 retained_intron
  ENST00000519943 HNRNPH1-038 179620733-179621686 retained_intron
  ENST00000519958 HNRNPH1-050 179615560-179621335 nonsense_mediated_decay
  ENST00000520415 HNRNPH1-036 179618144-179619708 retained_intron
  ENST00000521116 HNRNPH1-041 179620943-179634784 protein_coding
  ENST00000521173 HNRNPH1-049 179616869-179620959 protein_coding
  ENST00000521720 HNRNPH1-031 179614877-179617634 retained_intron
  ENST00000521790 HNRNPH1-040 179619273-179621511 protein_coding
  ENST00000522256 HNRNPH1-043 179623049-179634440 protein_coding
  ENST00000522958 HNRNPH1-037 179619101-179621370 retained_intron
  ENST00000523136 HNRNPH1-032 179616141-179616924 protein_coding
  ENST00000523137 HNRNPH1-046 179618218-179624669 protein_coding
  ENST00000523449 HNRNPH1-033 179614519-179617581 protein_coding
  ENST00000523921 HNRNPH1-035 179616874-179618301 protein_coding
  ENST00000524179 HNRNPH1-030 179614524-179616287 retained_intron
  ENST00000524180 HNRNPH1-048 179619469-179623164 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393432ENST00000442819ENST00000502632ENST00000502904ENST00000504549ENST00000510411ENST00000510678ENST00000514332ENST00000515481ENST00000519943ENST00000521173ENST00000523921
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393432 22.923±0.00 N/A N/A 27.342±0.00 N/A 34.124±0.00 10.031±0.00 37.597±0.00 N/A 53.550±0.00 N/A 50.579±3.85 25.379±9.07 21.357±0.00
ENST00000442819 N/A N/A N/A 12.800±6.74 37.245±0.00 N/A 9.298±4.91 N/A 7.662±1.32 N/A 19.474±0.00 67.347±0.00 13.842±4.07 28.270±0.00
ENST00000502632 N/A N/A 13.304±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502904 N/A N/A N/A N/A N/A N/A N/A 19.369±0.00 4.105±0.00 N/A N/A N/A N/A N/A
ENST00000504549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 70.345±0.00 N/A 214.941±0.00
ENST00000510411 N/A N/A N/A N/A N/A 18.361±0.00 N/A N/A N/A N/A 10.249±0.00 N/A N/A 17.581±0.00
ENST00000510678 N/A N/A N/A N/A N/A N/A N/A N/A 8.077±0.00 N/A N/A N/A N/A N/A
ENST00000514332 12.518±0.00 62.764±0.00 7.186±0.00 5.812±0.00 27.617±0.00 N/A N/A 9.754±0.00 9.581±0.00 14.651±0.00 6.004±0.00 N/A N/A N/A
ENST00000515481 4.176±0.00 18.565±0.00 N/A N/A 11.195±0.00 6.812±0.00 2.016±0.00 N/A 3.714±1.36 9.962±0.39 N/A N/A N/A N/A
ENST00000519943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.752±0.00 N/A N/A
ENST00000521173 N/A N/A N/A 58.618±0.00 N/A 55.298±0.00 N/A N/A N/A N/A N/A 71.860±0.00 84.404±0.00 149.797±92.68
ENST00000523921 N/A N/A 44.222±0.00 46.335±0.00 109.921±0.00 72.023±0.00 30.888±0.00 67.158±0.00 53.890±0.00 81.188±0.00 29.848±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0006396 TAS RNA processing
GO:0008266 TAS poly(U) RNA binding
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0043484 IDA regulation of RNA splicing
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005551 hnrnph1l heterogeneous nuclear ribonucleoprotein H1, like protein_coding Danio_rerio
ENSDARG00000040881 hnrnph1 heterogeneous nuclear ribonucleoprotein H1 protein_coding Danio_rerio
ENSMUSG00000007850 Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 protein_coding Mus_musculus

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