C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: armadillo repeat containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169126 ARMC4 9606 - 10:27812164-27999048 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305242 ARMC4-001 27812168-27999048 protein_coding
  ENST00000434029 ARMC4-002 27957049-27987449 protein_coding
  ENST00000467083 ARMC4-005 27812170-27813442 processed_transcript
  ENST00000480504 ARMC4-003 27944823-27981904 processed_transcript
  ENST00000481659 ARMC4-006 27812164-27836163 processed_transcript
  ENST00000486279 ARMC4-004 27994972-27997514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000305242ENST00000434029ENST00000467083ENST00000480504ENST00000481659ENST00000486279
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000305242 0.061±0.00 N/A 0.148±0.07 0.032±0.00 0.068±0.01 0.016±0.00 0.008±0.00 0.137±0.12 0.627±0.25 0.017±0.00 0.459±0.37 0.019±0.01
ENST00000434029 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.010±0.00 N/A
ENST00000467083 N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.603±0.00 N/A
ENST00000480504 N/A N/A 0.048±0.00 0.232±0.00 N/A N/A N/A N/A 0.709±0.00 N/A N/A N/A
ENST00000481659 0.103±0.00 0.051±0.00 N/A 0.082±0.00 N/A 0.117±0.00 0.141±0.00 N/A N/A N/A N/A N/A
ENST00000486279 N/A N/A N/A N/A N/A N/A N/A 2.307±0.00 N/A N/A 1.173±1.07 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077Y CIL_00077Y_0002 CGP 10:27672875-27999048
CIL_00077U CIL_00077U_0002 CGP 10:27812164-28334486

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003341 IEA cilium movement
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005856 IEA cytoskeleton
GO:0005930 IDA axoneme
GO:0021591 IEA ventricular system development
GO:0030030 IEA cell projection organization
GO:0036158 IEA outer dynein arm assembly
GO:0070986 IEA left/right axis specification
GO:0097546 IDA ciliary base

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055128 armc4 armadillo repeat containing 4 protein_coding Danio_rerio
ENSMUSG00000061802 Armc4 armadillo repeat containing 4 protein_coding Mus_musculus

Loading