C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00077Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075450-ENSDARG00000055128 CGP 7955 12:24311157-24478721
GeneTranscriptPositionBiotype
ENSDARG00000055128 (armc4)
armadillo repeat containing 4 		ENSDART00000077453 (armc4-201) 24376300-24478009 protein_coding
ENSDART00000152887 (armc4-002) 24476907-24478721 retained_intron
ENSDART00000153115 (armc4-003) 24376139-24417868 nonsense_mediated_decay
ENSDARG00000075450 (mkxa)
mohawk homeobox a 		ENSDART00000111801 (mkxa-001) 24311157-24358575 protein_coding
ENSDART00000149474 (mkxa-002) 24339503-24358575 retained_intron
CIL_00077Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150051-ENSG00000169126 CGP 9606 10:27672875-27999048
GeneTranscriptPositionBiotype
ENSG00000150051 (MKX)
mohawk homeobox 		ENST00000375790 (MKX-001) 27672875-27746060 protein_coding
ENST00000419761 (MKX-201) 27672875-27745849 protein_coding
ENST00000460919 (MKX-002) 27718563-27743545 protein_coding
ENST00000561227 (MKX-003) 27743242-27745594 protein_coding
ENSG00000169126 (ARMC4)
armadillo repeat containing 4 		ENST00000305242 (ARMC4-001) 27812168-27999048 protein_coding
ENST00000434029 (ARMC4-002) 27957049-27987449 protein_coding
ENST00000467083 (ARMC4-005) 27812170-27813442 processed_transcript
ENST00000480504 (ARMC4-003) 27944823-27981904 processed_transcript
ENST00000481659 (ARMC4-006) 27812164-27836163 processed_transcript
ENST00000486279 (ARMC4-004) 27994972-27997514 protein_coding
ENSG00000226016 (RPL36AP55)
ribosomal protein L36a pseudogene 55 		ENST00000454114 (RPL36AP55-001) 27904209-27905162 processed_pseudogene
ENSG00000230500 (MKX-AS1)
MKX antisense RNA 1 		ENST00000412244 (MKX-AS1-002) 27761589-27767793 antisense
ENST00000419777 (MKX-AS1-001) 27744786-27767794 antisense
CIL_00077Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061013-ENSMUSG00000061802 CGP 10090 18:6910459-7297901
GeneTranscriptPositionBiotype
ENSMUSG00000061013 (Mkx)
mohawk homeobox 		ENSMUST00000079788 (Mkx-001) 6934966-7004780 protein_coding
ENSMUST00000176586 (Mkx-004) 6910459-6936621 processed_transcript
ENSMUST00000176608 (Mkx-003) 7000636-7003782 processed_transcript
ENSMUST00000176757 (Mkx-002) 7002304-7004726 retained_intron
ENSMUST00000188926 (Mkx-005) 6936952-6992988 retained_intron
ENSMUSG00000061802 (Armc4)
armadillo repeat containing 4 		ENSMUST00000081275 (Armc4-201) 7088233-7297901 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077Y_0001ENSDARG00000055128ENSDART00000077453ENSDART00000152887ENSDART00000153115ENSDARG00000075450ENSDART00000111801ENSDART00000149474CIL_00077Y_0002ENSG00000150051ENST00000375790ENST00000419761ENST00000460919ENST00000561227ENSG00000169126ENST00000305242ENST00000434029ENST00000467083ENST00000480504ENST00000481659ENST00000486279ENSG00000226016ENST00000454114ENSG00000230500ENST00000412244ENST00000419777CIL_00077Y_0003ENSMUSG00000061013ENSMUST00000079788ENSMUST00000176586ENSMUST00000176608ENSMUST00000176757ENSMUST00000188926ENSMUSG00000061802ENSMUST00000081275
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077Y_0001ENSDARG00000055128ENSDART00000077453ENSDART00000153115ENSDARG00000075450ENSDART00000111801CIL_00077Y_0002ENSG00000150051ENST00000375790ENST00000419761ENST00000460919ENST00000561227ENSG00000169126ENST00000305242ENST00000434029ENST00000467083ENST00000480504ENST00000481659ENST00000486279ENSG00000226016ENST00000454114ENSG00000230500ENST00000412244ENST00000419777CIL_00077Y_0003ENSMUSG00000061013ENSMUST00000079788ENSMUST00000176608ENSMUST00000176757ENSMUST00000188926ENSMUSG00000061802ENSMUST00000081275
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055128 ENSDART00000077453 N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A 0.013±0.00 N/A 0.091±0.00 N/A N/A N/A
ENSDART00000152887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153115 N/A N/A N/A 0.404±0.00 N/A N/A 0.098±0.00 N/A N/A N/A 0.153±0.00 N/A N/A N/A
ENSDARG00000075450 ENSDART00000111801 N/A N/A N/A 4.539±0.81 N/A N/A 0.273±0.24 1.053±0.36 N/A N/A 0.303±0.00 N/A N/A N/A
ENSDART00000149474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150051 ENST00000375790 0.206±0.00 N/A N/A 0.531±0.11 N/A 0.176±0.00 N/A N/A N/A N/A N/A 0.991±0.00 N/A N/A
ENST00000419761 0.165±0.00 0.350±0.00 N/A 1.691±0.00 0.064±0.00 0.813±0.00 0.020±0.00 0.077±0.06 0.085±0.00 0.755±0.00 0.040±0.00 2.749±0.00 0.009±0.00 N/A
ENST00000460919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A
ENST00000561227 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.037±0.00 N/A N/A N/A N/A
ENSG00000169126 ENST00000305242 0.061±0.00 N/A N/A 0.148±0.07 0.032±0.00 0.068±0.01 0.016±0.00 0.008±0.00 0.137±0.12 0.627±0.25 0.017±0.00 0.459±0.37 0.019±0.01 N/A
ENST00000434029 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.010±0.00 N/A N/A
ENST00000467083 N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.603±0.00 N/A N/A
ENST00000480504 N/A N/A N/A 0.048±0.00 0.232±0.00 N/A N/A N/A N/A 0.709±0.00 N/A N/A N/A N/A
ENST00000481659 0.103±0.00 0.051±0.00 N/A N/A 0.082±0.00 N/A 0.117±0.00 0.141±0.00 N/A N/A N/A N/A N/A N/A
ENST00000486279 N/A N/A N/A N/A N/A N/A N/A N/A 2.307±0.00 N/A N/A 1.173±1.07 N/A N/A
ENSG00000226016 ENST00000454114 N/A 0.188±0.00 N/A 0.067±0.00 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230500 ENST00000412244 0.087±0.00 0.154±0.00 N/A 0.136±0.00 0.149±0.00 0.037±0.00 0.015±0.00 0.165±0.00 N/A 0.060±0.00 N/A 0.044±0.00 N/A 0.147±0.00
ENST00000419777 0.122±0.00 N/A N/A N/A N/A 0.042±0.00 0.024±0.00 N/A N/A N/A 0.213±0.00 0.327±0.07 0.159±0.00 0.084±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000061013 ENSMUST00000079788 0.192±0.18 1.477±0.11 0.197±0.06 0.459±0.35 0.040±0.01 1.838±0.79 0.029±0.00 0.106±0.05 0.157±0.12 0.092±0.06 0.118±0.04 3.594±1.39 0.225±0.07 0.114±0.06
ENSMUST00000176586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176608 N/A N/A 0.482±0.00 0.969±0.00 0.099±0.06 N/A 0.057±0.00 0.080±0.00 0.092±0.03 0.118±0.07 0.327±0.00 N/A N/A 0.219±0.09
ENSMUST00000176757 N/A 4.609±1.78 N/A N/A 0.163±0.06 3.114±0.97 0.146±0.08 0.107±0.00 0.667±0.20 0.216±0.07 0.360±0.00 10.034±3.37 0.559±0.00 0.295±0.00
ENSMUST00000188926 0.347±0.00 N/A N/A 4.455±0.00 0.139±0.06 N/A 0.177±0.01 0.431±0.00 0.170±0.00 N/A 0.171±0.00 12.900±0.00 0.589±0.11 0.184±0.00
ENSMUSG00000061802 ENSMUST00000081275 N/A N/A 0.003±0.00 0.118±0.09 N/A 0.046±0.02 0.033±0.02 N/A 0.002±0.00 0.418±0.21 0.011±0.00 1.066±0.38 0.010±0.01 8.056±2.45

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